Variant report

Variant rs3788118
Chromosome Location chr21:45727699-45727700
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:45720800-45731000 Weak transcription Aorta Aorta
2 chr21:45721000-45757600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr21:45721200-45730800 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr21:45721200-45730800 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr21:45721200-45731000 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr21:45721200-45731000 Weak transcription Fetal Kidney kidney
7 chr21:45721200-45731000 Weak transcription Osteobl bone
8 chr21:45721200-45733600 Weak transcription NH-A brain
9 chr21:45721400-45728200 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr21:45721400-45729000 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr21:45721600-45736200 Weak transcription HSMMtube muscle
12 chr21:45722000-45729800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr21:45722000-45730600 Weak transcription HSMM muscle
14 chr21:45722600-45734000 Weak transcription Hela-S3 cervix
15 chr21:45722800-45730600 Weak transcription A549 lung
16 chr21:45723600-45735000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr21:45723800-45730800 Weak transcription HMEC breast
18 chr21:45723800-45731200 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr21:45724400-45729400 Weak transcription Primary B cells from cord blood blood
20 chr21:45724600-45744000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr21:45724800-45731200 Weak transcription Fetal Heart heart
22 chr21:45724800-45748400 Strong transcription Dnd41 blood
23 chr21:45725000-45729000 Weak transcription Fetal Thymus thymus
24 chr21:45725000-45729800 Weak transcription K562 blood
25 chr21:45725000-45730800 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr21:45725000-45738800 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr21:45725000-45758000 Weak transcription Right Atrium heart
28 chr21:45725200-45728800 Strong transcription Primary B cells from peripheral blood blood
29 chr21:45725200-45728800 Weak transcription Placenta Amnion Placenta Amnion
30 chr21:45725200-45730200 Weak transcription H1 Cell Line embryonic stem cell
31 chr21:45725200-45731800 Weak transcription Small Intestine intestine
32 chr21:45725200-45734800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr21:45725400-45731000 Weak transcription Fetal Brain Male brain
34 chr21:45725400-45734600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr21:45725400-45747800 Strong transcription Sigmoid Colon Sigmoid Colon
36 chr21:45725400-45748000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
37 chr21:45725600-45727800 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr21:45725600-45730400 Weak transcription Left Ventricle heart
39 chr21:45725600-45747600 Strong transcription Primary T helper naive cells fromperipheralblood blood
40 chr21:45725600-45748000 Strong transcription Primary T regulatory cells fromperipheralblood blood
41 chr21:45725600-45752800 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr21:45725800-45729800 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr21:45725800-45734600 Strong transcription Placenta Placenta
44 chr21:45725800-45757400 Strong transcription Thymus Thymus
45 chr21:45726000-45730200 Weak transcription HUVEC blood vessel
46 chr21:45726000-45747800 Strong transcription Stomach Smooth Muscle stomach
47 chr21:45726000-45749200 Strong transcription NHLF lung
48 chr21:45726200-45727800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
49 chr21:45726200-45728200 Strong transcription Ovary ovary
50 chr21:45726200-45728400 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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