Variant report

Variant rs3788226
Chromosome Location chr21:47300115-47300116
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47266800-47300600 Weak transcription Right Atrium heart
2 chr21:47295600-47300200 Weak transcription Thymus Thymus
3 chr21:47295600-47309200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr21:47296800-47300200 Weak transcription Right Ventricle heart
5 chr21:47297000-47300400 Weak transcription Fetal Brain Male brain
6 chr21:47298000-47306600 Weak transcription NH-A brain
7 chr21:47298400-47300200 Weak transcription Placenta Placenta
8 chr21:47298800-47300200 Weak transcription Esophagus oesophagus
9 chr21:47299200-47301800 Enhancers Primary T helper cells fromperipheralblood blood
10 chr21:47299400-47301600 Enhancers Primary T cells from cord blood blood
11 chr21:47299600-47300200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr21:47299600-47300200 Enhancers NHEK skin
13 chr21:47299600-47301400 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr21:47299600-47301600 Enhancers Primary T regulatory cells fromperipheralblood blood
15 chr21:47299600-47302000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr21:47299600-47302600 Enhancers Primary T helper cells PMA-I stimulated --
17 chr21:47299600-47303000 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr21:47299800-47300400 Enhancers HMEC breast
19 chr21:47299800-47300600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr21:47299800-47300800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr21:47299800-47300800 Bivalent Enhancer Primary T cells fromperipheralblood blood
22 chr21:47299800-47301000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
23 chr21:47299800-47301000 Enhancers Primary mononuclear cells fromperipheralblood Blood
24 chr21:47299800-47301000 Enhancers Brain Hippocampus Middle brain
25 chr21:47299800-47301000 Enhancers Brain Substantia Nigra brain
26 chr21:47299800-47301000 Bivalent Enhancer Fetal Muscle Leg muscle
27 chr21:47299800-47301200 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr21:47299800-47301200 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr21:47299800-47301200 Enhancers Muscle Satellite Cultured Cells --
30 chr21:47299800-47301200 Enhancers HSMM muscle
31 chr21:47299800-47301600 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr21:47299800-47301600 Enhancers Fetal Thymus thymus
33 chr21:47299800-47302000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
34 chr21:47300000-47300200 Enhancers Brain Angular Gyrus brain
35 chr21:47300000-47300400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr21:47300000-47300400 Enhancers Psoas Muscle Psoas
37 chr21:47300000-47300400 Enhancers Monocytes-CD14+_RO01746 blood
38 chr21:47300000-47300600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr21:47300000-47300600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr21:47300000-47300800 Enhancers Primary monocytes fromperipheralblood blood
41 chr21:47300000-47300800 Enhancers Primary Natural Killer cells fromperipheralblood blood
42 chr21:47300000-47301000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr21:47300000-47301000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr21:47300000-47301000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
45 chr21:47300000-47301000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
46 chr21:47300000-47301000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr21:47300000-47301000 Enhancers Adipose Nuclei Adipose
48 chr21:47300000-47301000 Enhancers Brain Anterior Caudate brain
49 chr21:47300000-47301000 Bivalent Enhancer Fetal Muscle Trunk muscle
50 chr21:47300000-47301000 Enhancers Spleen Spleen

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