Variant report

Variant rs3789090
Chromosome Location chr2:111789092-111789093
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:111785600-111790200 Enhancers Primary neutrophils fromperipheralblood blood
2 chr2:111786000-111795800 Enhancers Primary monocytes fromperipheralblood blood
3 chr2:111786200-111792400 Enhancers Fetal Lung lung
4 chr2:111786400-111790400 Enhancers Rectal Mucosa Donor 31 rectum
5 chr2:111786600-111790600 Enhancers Duodenum Mucosa Duodenum
6 chr2:111786800-111790000 Enhancers Rectal Mucosa Donor 29 rectum
7 chr2:111786800-111792800 Enhancers Fetal Intestine Small intestine
8 chr2:111787000-111789200 Enhancers Fetal Heart heart
9 chr2:111787000-111789800 Enhancers Fetal Stomach stomach
10 chr2:111787000-111792000 Enhancers Stomach Mucosa stomach
11 chr2:111787000-111792800 Enhancers Fetal Intestine Large intestine
12 chr2:111787400-111795600 Weak transcription H1 Cell Line embryonic stem cell
13 chr2:111787800-111790200 Bivalent Enhancer HepG2 liver
14 chr2:111787800-111790200 Weak transcription HMEC breast
15 chr2:111787800-111825400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr2:111788000-111789600 Weak transcription Small Intestine intestine
17 chr2:111788000-111789600 Weak transcription A549 lung
18 chr2:111788000-111789800 Weak transcription Right Atrium heart
19 chr2:111788000-111789800 Weak transcription Spleen Spleen
20 chr2:111788000-111790600 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr2:111788000-111791200 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr2:111788000-111791600 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr2:111788200-111789200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr2:111788200-111789200 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr2:111788200-111789600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr2:111788200-111789600 Weak transcription Placenta Placenta
27 chr2:111788200-111790200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr2:111788200-111790200 Weak transcription Pancreas Pancrea
29 chr2:111788200-111790600 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr2:111788200-111791200 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr2:111788200-111792600 Weak transcription H9 Cell Line embryonic stem cell
32 chr2:111788200-111793400 Weak transcription Fetal Thymus thymus
33 chr2:111788200-111799200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr2:111788400-111789200 Enhancers Monocytes-CD14+_RO01746 blood
35 chr2:111788600-111789800 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr2:111788600-111790200 Weak transcription Primary B cells from cord blood blood
37 chr2:111788600-111791400 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr2:111788800-111789200 Enhancers GM12878-XiMat blood
39 chr2:111789000-111789400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr2:111789000-111789400 Enhancers Skeletal Muscle Male skeletal muscle
41 chr2:111789000-111790600 Enhancers Colonic Mucosa Colon

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