Variant report

Variant rs378993
Chromosome Location chr21:45661518-45661519
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:45658600-45663400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr21:45659600-45662000 Active TSS Brain Substantia Nigra brain
3 chr21:45659600-45662000 Bivalent/Poised TSS HSMM muscle
4 chr21:45659800-45661600 Bivalent/Poised TSS Brain Angular Gyrus brain
5 chr21:45659800-45661800 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr21:45659800-45662400 Active TSS iPS-15b Cell Line embryonic stem cell
7 chr21:45659800-45662600 Active TSS H9 Cell Line embryonic stem cell
8 chr21:45659800-45662600 Bivalent/Poised TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr21:45659800-45662600 Active TSS HSMMtube muscle
10 chr21:45659800-45662800 Active TSS Left Ventricle heart
11 chr21:45659800-45663000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
12 chr21:45659800-45663200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
13 chr21:45660000-45661600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr21:45660000-45661600 Flanking Bivalent TSS/Enh IMR90 fetal lung fibroblasts Cell Line lung
15 chr21:45660000-45661600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr21:45660000-45661600 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
17 chr21:45660000-45662000 Active TSS Sigmoid Colon Sigmoid Colon
18 chr21:45660000-45662400 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
19 chr21:45660000-45662600 Bivalent Enhancer Fetal Brain Male brain
20 chr21:45660000-45663000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
21 chr21:45660000-45663400 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
22 chr21:45660200-45661600 Bivalent/Poised TSS Colon Smooth Muscle Colon
23 chr21:45660200-45662200 Bivalent/Poised TSS Fetal Intestine Large intestine
24 chr21:45660200-45662400 Active TSS HUES48 Cell Line embryonic stem cell
25 chr21:45660200-45662600 Active TSS ES-WA7 Cell Line embryonic stem cell
26 chr21:45660200-45662600 Active TSS Gastric stomach
27 chr21:45660200-45662600 Active TSS Right Atrium heart
28 chr21:45660200-45662600 Active TSS Hela-S3 cervix
29 chr21:45660200-45662600 Active TSS HepG2 liver
30 chr21:45660200-45663000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
31 chr21:45660200-45663200 Active TSS GM12878-XiMat blood
32 chr21:45660400-45662200 Active TSS H1 Cell Line embryonic stem cell
33 chr21:45660400-45662200 Active TSS Placenta Amnion Placenta Amnion
34 chr21:45660400-45662400 Active TSS Primary T helper memory cells from peripheral blood 2 blood
35 chr21:45660400-45663000 Active TSS Primary B cells from peripheral blood blood
36 chr21:45660400-45663000 Active TSS Small Intestine intestine
37 chr21:45660400-45663400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
38 chr21:45660600-45662000 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
39 chr21:45660600-45663200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
40 chr21:45660800-45661800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
41 chr21:45660800-45662600 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr21:45661000-45661600 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr21:45661000-45661600 Flanking Bivalent TSS/Enh H9 Derived Neuron Cultured Cells ES cell derived
44 chr21:45661000-45661600 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
45 chr21:45661000-45661600 Flanking Active TSS Primary hematopoietic stem cells blood
46 chr21:45661000-45661600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
47 chr21:45661000-45661600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
48 chr21:45661000-45661600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr21:45661000-45661600 Flanking Bivalent TSS/Enh Ganglion Eminence derived primary cultured neurospheres brain
50 chr21:45661000-45661600 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin

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