Variant report

Variant rs3797996
Chromosome Location chr5:9360641-9360642
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:9332800-9372400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr5:9347000-9365600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:9355200-9370200 Weak transcription Pancreas Pancrea
4 chr5:9357200-9377800 Weak transcription Fetal Intestine Large intestine
5 chr5:9357800-9363200 Weak transcription Brain Hippocampus Middle brain
6 chr5:9357800-9365800 Weak transcription Brain Germinal Matrix brain
7 chr5:9358000-9389400 Weak transcription Brain Substantia Nigra brain
8 chr5:9358600-9361800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr5:9358600-9362000 Weak transcription Fetal Muscle Leg muscle
10 chr5:9358800-9363400 Weak transcription Fetal Stomach stomach
11 chr5:9358800-9369000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr5:9358800-9372400 Weak transcription Fetal Intestine Small intestine
13 chr5:9359200-9361600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr5:9359200-9365800 Weak transcription Left Ventricle heart
15 chr5:9359200-9382800 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr5:9359400-9361800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr5:9359400-9362400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr5:9359400-9363400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr5:9359600-9361600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr5:9359600-9361800 Weak transcription Placenta Amnion Placenta Amnion
21 chr5:9359600-9363800 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr5:9359600-9372400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr5:9359800-9363200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr5:9359800-9363200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr5:9359800-9363400 Weak transcription NHDF-Ad bronchial
26 chr5:9359800-9372400 Weak transcription Fetal Kidney kidney
27 chr5:9360000-9362000 Weak transcription Osteobl bone
28 chr5:9360000-9362800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr5:9360000-9363400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr5:9360200-9363000 Weak transcription NH-A brain
31 chr5:9360200-9363400 Weak transcription Muscle Satellite Cultured Cells --
32 chr5:9360400-9362000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr5:9360400-9362200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr5:9360400-9363000 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr5:9360400-9363000 Weak transcription Fetal Heart heart
36 chr5:9360400-9363000 Weak transcription NHLF lung
37 chr5:9360400-9370200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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