Variant report

Variant	rs3806755
Chromosome Location	chr4:979030-979031
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr4:978873-979287	HepG2	liver:	n/a	n/a
2	SIN3A	chr4:978925-979209	GM12878	blood:	n/a	chr4:979117-979130
3	MAZ	chr4:978942-979173	GM12878	blood:	n/a	chr4:979097-979107
4	UBTF	chr4:979020-979304	K562	blood:	n/a	n/a
5	POLR2A	chr4:978922-979255	HepG2	liver:	n/a	n/a
6	CTCF	chr4:978880-979030	MCF-7	breast:	n/a	n/a
7	WRNIP1	chr4:978854-979054	GM12878	blood:	n/a	n/a
8	TBP	chr4:979005-979147	GM12878	blood:	n/a	n/a
9	IRF1	chr4:978915-979293	K562	blood:	n/a	chr4:979092-979106
10	MYBL2	chr4:978742-979333	HepG2	liver:	n/a	n/a
11	CUX1	chr4:978937-979325	K562	blood:	n/a	n/a
12	CTCF	chr4:978980-979130	GM12878	blood:	n/a	chr4:979098-979111
13	CTCF	chr4:979000-979150	HBMEC	blood vessel:	n/a	chr4:979098-979111
14	POLR2A	chr4:978810-979443	SK-N-MC	brain:	n/a	n/a
15	POLR2A	chr4:978797-979378	HepG2	liver:	n/a	n/a
16	USF2	chr4:979012-979301	GM12878	blood:	n/a	n/a
17	CTCF	chr4:979003-979114	MCF-7	breast:	n/a	chr4:979098-979111
18	E2F6	chr4:978911-979229	K562	blood:	n/a	chr4:979096-979105
19	CBX3	chr4:978804-979451	K562	blood:	n/a	n/a
20	RAD21	chr4:978940-979245	HepG2	liver:	n/a	n/a
21	CTCF	chr4:978900-979050	HVMF	connective:	n/a	n/a
22	YY1	chr4:978853-979173	ECC-1	luminal epithelium:	n/a	chr4:979033-979055 chr4:979096-979105 chr4:979032-979044 chr4:979094-979108
23	CTCF	chr4:979020-979170	GM12871	blood:	n/a	chr4:979098-979111
24	MAX	chr4:978820-979390	K562	blood:	n/a	chr4:979097-979107
25	POLR2A	chr4:978819-979406	HepG2	liver:	n/a	n/a
26	MAX	chr4:978777-979282	MCF-7	breast:	n/a	chr4:979097-979107
27	CTCF	chr4:978980-979130	HUVEC	blood vessel:	n/a	chr4:979098-979111
28	RUNX3	chr4:978863-979315	GM12878	blood:	n/a	n/a
29	REST	chr4:978963-979252	K562	blood:	n/a	n/a
30	CTCF	chr4:979020-979170	HRPEpiC	eye:	n/a	chr4:979098-979111
31	POLR2A	chr4:978938-979212	HUVEC	blood vessel:	n/a	n/a
32	TEAD4	chr4:978752-979347	K562	blood:	n/a	n/a
33	POLR2A	chr4:978902-979299	ECC-1	luminal epithelium:	n/a	n/a
34	POLR2A	chr4:978708-979433	HepG2	liver:	n/a	n/a
35	RAD21	chr4:979026-979248	HepG2	liver:	n/a	n/a
36	TBP	chr4:978840-979348	K562	blood:	n/a	n/a
37	SIN3AK20	chr4:978870-979192	K562	blood:	n/a	n/a
38	POLR2A	chr4:978667-979582	HepG2	liver:	n/a	n/a
39	YY1	chr4:978858-979205	GM12878	blood:	n/a	chr4:979033-979055 chr4:979096-979105 chr4:979032-979044 chr4:979094-979108
40	POLR2A	chr4:978863-979385	K562	blood:	n/a	n/a
41	EP300	chr4:979013-979208	GM12878	blood:	n/a	chr4:979091-979100
42	POLR2A	chr4:978755-979315	K562	blood:	n/a	n/a
43	POLR2A	chr4:978939-979242	GM12878	blood:	n/a	n/a
44	HCFC1	chr4:978865-979309	K562	blood:	n/a	n/a
45	MXI1	chr4:978702-979324	K562	blood:	n/a	n/a
46	CTCF	chr4:979000-979150	K562	blood:	n/a	chr4:979098-979111
47	YY1	chr4:978880-979241	H1-hESC	embryonic stem cell:	n/a	chr4:979033-979055 chr4:979096-979105 chr4:979032-979044 chr4:979094-979108
48	CTCF	chr4:979000-979150	GM12878	blood:	n/a	chr4:979098-979111
49	YY1	chr4:978787-979288	HepG2	liver:	n/a	chr4:979033-979055 chr4:979096-979105 chr4:979032-979044 chr4:979094-979108
50	PML	chr4:978834-979354	K562	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:979022-979072	HRPEpiC	eye:	n/a
2	chr4:979022-979072	SK-N-MC	brain:	n/a
3	chr4:979022-979072	NH-A	brain:	n/a
4	chr4:979022-979072	HCT-116	colon:	n/a
5	chr4:979022-979072	HIPEpiC	eye:	n/a
6	chr4:979022-979072	GM12878	blood:	n/a
7	chr4:979022-979072	CMK	blood:	n/a
8	chr4:979022-979072	SAEC	small airway:	n/a
9	chr4:979022-979072	HL-60	blood:	n/a
10	chr4:979022-979072	A549	lung:	n/a
11	chr4:979022-979072	PANC-1	pancreas:	n/a
12	chr4:979022-979072	HepG2	liver:	n/a
13	chr4:979022-979072	Hela-S3	cervix:	n/a
14	chr4:979022-979072	GM12892	blood:	n/a
15	chr4:979022-979072	AG04449	skin:	fetal
16	chr4:979022-979072	Caco-2	colon:	n/a
17	chr4:979022-979072	NHDF-neo	bronchial:	n/a
18	chr4:979022-979072	ECC-1	luminal epithelium:	n/a
19	chr4:979022-979072	T-47D	breast:	n/a
20	chr4:979022-979072	Hepatocyte	liver:	n/a
21	chr4:979022-979072	MCF10A-Er-Src	breast:	n/a
22	chr4:979022-979072	Jurkat	blood:	n/a
23	chr4:979022-979072	HCF	heart:	n/a
24	chr4:979022-979072	HNPCEpiC	eye:	n/a
25	chr4:979022-979072	SK-N-SH	brain:	n/a
26	chr4:979022-979072	HEEpiC	esophagus:	n/a
27	chr4:979022-979072	GM06990	blood:	n/a
28	chr4:979022-979072	PFSK-1	brain:	n/a
29	chr4:979022-979072	NT2-D1	testis:	n/a
30	chr4:979022-979072	HRCEpiC	kidney:	n/a
31	chr4:979022-979072	GM19239	blood:	n/a
32	chr4:979022-979072	HCM	heart:	n/a
33	chr4:979022-979072	MCF-7	breast:	n/a
34	chr4:979022-979072	K562	blood:	n/a
35	chr4:979022-979072	AG09309	skin:	n/a
36	chr4:979022-979072	IMR90	lung:	fetal
37	chr4:979022-979072	H1-hESC	embryonic stem cell:	embryo
38	chr4:979022-979072	BJ	skin:	n/a
39	chr4:979022-979072	AG04450	lung:	fetal
40	chr4:979022-979072	HAEpiC	amniotic membrane:	n/a
41	chr4:979022-979072	HCPEpiC	choroid plexus:	n/a
42	chr4:979022-979072	HEK293	kidney:	embryo
43	chr4:979022-979072	GM12891	blood:	n/a
44	chr4:979022-979072	HUVEC	blood vessel:	n/a
45	chr4:979022-979072	SKMC	muscle:	n/a
46	chr4:979022-979072	AoSMC	blood vessel:	n/a
47	chr4:979022-979072	BE2_C	brain:	n/a
48	chr4:979022-979072	ProgFib	skin:	n/a
49	chr4:979022-979072	HMEC	breast:	n/a
50	chr4:979022-979072	RPTEC	kidney:	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:926081..926886-chr4:978645..979437,2	MCF-7	breast:
2	chr4:923619..928083-chr4:975582..982523,10	K562	blood:
3	chr4:923541..927987-chr4:977936..983574,14	MCF-7	breast:
4	chr4:892319..894629-chr4:977981..979621,2	MCF-7	breast:
5	chr4:978904..979497-chr4:164087723..164088281,2	HCT-116	colon:
6	chr4:960856..970258-chr4:974782..984618,21	MCF-7	breast:

Variant related genes	Relation type
IDUA	TF binding region
IDUA	CpG island
ENSG00000127419	Chromatin interaction
ENSG00000145414	Chromatin interaction
ENSG00000178950	Chromatin interaction
ENSG00000145214	Chromatin interaction

Extended variants
information (count: 77 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs2335500	0.90[EUR][1000 genomes]
rs28504502	1.00[CHB][hapmap]
rs3775118	0.80[ASN][1000 genomes]
rs3796623	0.85[EUR][1000 genomes]
rs56664216	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6814300	0.90[EUR][1000 genomes]
rs6820943	0.80[ASN][1000 genomes]
rs6856425	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7695319	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:68 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv822425	chr4:540105-1413799	Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
2	nsv530490	chr4:614355-1399150	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
3	esv1829397	chr4:655939-1041957	Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
4	nsv878255	chr4:708932-1052488	Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
5	nsv878258	chr4:712222-1058358	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
6	nsv878260	chr4:713920-1052488	Bivalent Enhancer Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
7	nsv878261	chr4:756686-1047794	Active TSS Genic enhancers Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
8	nsv1003219	chr4:769894-1105464	Strong transcription Weak transcription Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
9	nsv878263	chr4:771587-1047794	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
10	nsv432547	chr4:782301-1053930	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
11	nsv878264	chr4:790757-1047794	Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Active TSS Bivalent/Poised TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
12	nsv878265	chr4:793929-1024752	Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
13	nsv878266	chr4:793929-1058358	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
14	nsv878269	chr4:795890-1024752	Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
15	nsv878270	chr4:798962-1024752	Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
16	nsv469998	chr4:809593-1087531	Strong transcription Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
17	nsv878272	chr4:809787-1058358	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
18	nsv1008352	chr4:813393-1035416	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
19	nsv878276	chr4:813393-1047794	Genic enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
20	nsv878277	chr4:813393-1087531	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
21	nsv1012895	chr4:827866-1054874	Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
22	nsv536979	chr4:827866-1054874	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
23	nsv536980	chr4:827866-1167377	Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
24	nsv878280	chr4:828148-1052488	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
25	nsv878283	chr4:862156-1052488	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
26	nsv878285	chr4:891098-1052488	Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
27	nsv1009619	chr4:901897-1215657	Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
28	nsv1003876	chr4:927509-1191316	Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
29	nsv1000381	chr4:927509-1198766	Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
30	nsv870410	chr4:927839-1090974	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
31	nsv878286	chr4:928684-994414	Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
32	nsv878287	chr4:928684-1001447	Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
33	esv1838544	chr4:939883-1004463	Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
34	nsv878288	chr4:939883-1019011	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
35	nsv878289	chr4:939883-1047794	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
36	nsv878290	chr4:939883-1052488	Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
37	nsv878291	chr4:939883-1058358	Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
38	nsv878292	chr4:939883-1087531	Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
39	nsv878293	chr4:941518-1047794	Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
40	nsv878294	chr4:941518-1052488	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
41	nsv878295	chr4:941518-1064116	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
42	esv1846290	chr4:941518-1081307	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
43	nsv461149	chr4:942006-1019011	Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
44	nsv593226	chr4:942006-1019011	Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
45	nsv878296	chr4:942006-1019011	Bivalent Enhancer Enhancers Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
46	nsv878297	chr4:942006-1024752	Bivalent/Poised TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
47	esv1799097	chr4:944191-1053162	Flanking Bivalent TSS/Enh Weak transcription Active TSS Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
48	nsv878299	chr4:946974-1009420	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
49	nsv878298	chr4:946974-1011115	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
50	nsv878300	chr4:946974-1024752	Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:111 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:968000-979800	Weak transcription	Ovary	ovary
2	chr4:968000-979800	Weak transcription	Stomach Smooth Muscle	stomach
3	chr4:974000-979200	Weak transcription	Spleen	Spleen
4	chr4:975000-980000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr4:978200-980000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
6	chr4:978200-980200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr4:978600-979200	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
8	chr4:978600-979200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr4:978600-979200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
10	chr4:978600-979400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr4:978600-979400	Flanking Active TSS	Primary T cells fromperipheralblood	blood
12	chr4:978600-979400	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
13	chr4:978600-979400	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
14	chr4:978600-979400	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
15	chr4:978600-979400	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr4:978600-979400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr4:978600-979400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr4:978600-979400	Flanking Active TSS	Adipose Nuclei	Adipose
19	chr4:978600-979400	Flanking Active TSS	Liver	Liver
20	chr4:978600-979400	Flanking Active TSS	Brain Germinal Matrix	brain
21	chr4:978600-979400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
22	chr4:978600-979600	Enhancers	Primary neutrophils fromperipheralblood	blood
23	chr4:978600-979800	Enhancers	Primary hematopoietic stem cells short term culture	blood
24	chr4:978600-979800	Enhancers	Cortex derived primary cultured neurospheres	brain
25	chr4:978600-979800	Enhancers	Duodenum Smooth Muscle	Duodenum
26	chr4:978600-979800	Enhancers	Fetal Brain Male	brain
27	chr4:978600-980000	Enhancers	Fetal Heart	heart
28	chr4:978600-980000	Enhancers	Fetal Lung	lung
29	chr4:978600-980000	Flanking Active TSS	HepG2	liver
30	chr4:978600-980200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
31	chr4:978600-980200	Enhancers	Primary monocytes fromperipheralblood	blood
32	chr4:978600-980200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
33	chr4:978600-980200	Enhancers	Placenta	Placenta
34	chr4:978600-980200	Flanking Active TSS	K562	blood
35	chr4:978600-980400	Enhancers	Small Intestine	intestine
36	chr4:978600-980600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
37	chr4:978600-981600	Active TSS	Pancreatic Islets	Pancreatic Islet
38	chr4:978800-979200	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
39	chr4:978800-979200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
40	chr4:978800-979200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
41	chr4:978800-979200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr4:978800-979200	Flanking Active TSS	Primary B cells from cord blood	blood
43	chr4:978800-979200	Flanking Active TSS	Primary B cells from peripheral blood	blood
44	chr4:978800-979200	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
45	chr4:978800-979200	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr4:978800-979200	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
47	chr4:978800-979200	Flanking Active TSS	Brain Anterior Caudate	brain
48	chr4:978800-979200	Flanking Active TSS	Fetal Brain Female	brain
49	chr4:978800-979200	Flanking Active TSS	Fetal Intestine Small	intestine
50	chr4:978800-979200	Flanking Active TSS	Pancreas	Pancrea

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