The 2.0 version of rSNPBase

Variant report

Variant rs3807092
Chromosome Location chr7:80384869-80384870
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:80363600-80385200 Weak transcription Fetal Stomach stomach
2 chr7:80368400-80394800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr7:80369200-80402200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr7:80370600-80400400 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr7:80370800-80392200 Weak transcription Fetal Lung lung
6 chr7:80370800-80396000 Weak transcription Aorta Aorta
7 chr7:80371000-80410000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr7:80371200-80385200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr7:80372000-80392600 Weak transcription Ovary ovary
10 chr7:80372400-80401000 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr7:80372800-80396200 Weak transcription Lung lung
12 chr7:80373000-80386000 Weak transcription Right Ventricle heart
13 chr7:80373800-80396600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr7:80374200-80396000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr7:80374600-80386400 Weak transcription Primary monocytes fromperipheralblood blood
16 chr7:80374600-80396000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr7:80374600-80401000 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr7:80374600-80410200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr7:80378200-80410600 Weak transcription Fetal Brain Female brain
20 chr7:80378400-80385600 Weak transcription Stomach Smooth Muscle stomach
21 chr7:80378400-80393400 Weak transcription Brain Inferior Temporal Lobe brain
22 chr7:80378400-80395000 Weak transcription Left Ventricle heart
23 chr7:80378600-80389000 Weak transcription Brain Hippocampus Middle brain
24 chr7:80378600-80389400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr7:80378600-80389600 Weak transcription Fetal Kidney kidney
26 chr7:80378800-80389000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr7:80378800-80390200 Strong transcription NHDF-Ad bronchial
28 chr7:80378800-80392600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr7:80379000-80392000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr7:80379000-80412800 Weak transcription Fetal Intestine Small intestine
31 chr7:80379200-80385600 Weak transcription Psoas Muscle Psoas
32 chr7:80379400-80385800 Weak transcription NH-A brain
33 chr7:80379600-80385000 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr7:80379600-80385800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr7:80379600-80386400 Weak transcription Adipose Nuclei Adipose
36 chr7:80379600-80393400 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr7:80379600-80393400 Weak transcription Rectal Smooth Muscle rectum
38 chr7:80379600-80396000 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr7:80379600-80400800 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr7:80379800-80385200 Weak transcription NHEK skin
41 chr7:80379800-80400000 Weak transcription Fetal Intestine Large intestine
42 chr7:80379800-80401000 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr7:80380200-80385200 Weak transcription Fetal Muscle Trunk muscle
44 chr7:80380200-80385200 Weak transcription HSMMtube muscle
45 chr7:80381000-80385200 Weak transcription NHLF lung
46 chr7:80381200-80385200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr7:80381600-80389600 Strong transcription A549 lung
48 chr7:80383000-80385000 Weak transcription HMEC breast
49 chr7:80383000-80385200 Weak transcription Fetal Muscle Leg muscle
50 chr7:80383000-80386000 Weak transcription Colon Smooth Muscle Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015