Variant report

Variant rs3810168
Chromosome Location chr19:55896709-55896710
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:55894400-55897400 Active TSS HUES6 Cell Line embryonic stem cell
2 chr19:55894600-55896800 Enhancers Fetal Heart heart
3 chr19:55894600-55898200 Active TSS H9 Cell Line embryonic stem cell
4 chr19:55894600-55898600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
5 chr19:55894800-55897800 Active TSS ES-I3 Cell Line embryonic stem cell
6 chr19:55894800-55897800 Active TSS HUES64 Cell Line embryonic stem cell
7 chr19:55894800-55899000 Active TSS Small Intestine intestine
8 chr19:55894800-55899200 Active TSS Pancreatic Islets Pancreatic Islet
9 chr19:55894800-55899600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr19:55895000-55897800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
11 chr19:55895000-55898000 Active TSS Psoas Muscle Psoas
12 chr19:55895000-55898400 Active TSS Aorta Aorta
13 chr19:55895200-55898400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr19:55895400-55896800 Flanking Active TSS Primary hematopoietic stem cells blood
15 chr19:55895400-55896800 Flanking Active TSS Stomach Smooth Muscle stomach
16 chr19:55895400-55897000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
17 chr19:55895600-55896800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
18 chr19:55895600-55896800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
19 chr19:55895600-55896800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
20 chr19:55895600-55896800 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
21 chr19:55895600-55896800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr19:55895600-55896800 Flanking Active TSS Muscle Satellite Cultured Cells --
23 chr19:55895600-55896800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
24 chr19:55895600-55896800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
25 chr19:55895600-55896800 Flanking Active TSS Liver Liver
26 chr19:55895600-55896800 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
27 chr19:55895600-55896800 Enhancers Fetal Brain Male brain
28 chr19:55895600-55896800 Flanking Active TSS Fetal Muscle Trunk muscle
29 chr19:55895600-55896800 Weak transcription Ovary ovary
30 chr19:55895600-55896800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
31 chr19:55895600-55896800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
32 chr19:55895600-55897000 Flanking Active TSS Primary B cells from cord blood blood
33 chr19:55895600-55897000 Flanking Active TSS Primary B cells from peripheral blood blood
34 chr19:55895600-55897000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr19:55895800-55896800 Flanking Active TSS Primary monocytes fromperipheralblood blood
36 chr19:55895800-55896800 Flanking Active TSS Primary T cells from cord blood blood
37 chr19:55895800-55896800 Flanking Active TSS Primary T cells fromperipheralblood blood
38 chr19:55895800-55896800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
39 chr19:55895800-55896800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
40 chr19:55895800-55896800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
41 chr19:55895800-55896800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
42 chr19:55895800-55896800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
43 chr19:55895800-55896800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
44 chr19:55895800-55896800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
45 chr19:55895800-55896800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
46 chr19:55895800-55896800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr19:55895800-55896800 Flanking Active TSS Fetal Muscle Leg muscle
48 chr19:55895800-55896800 Flanking Active TSS Fetal Stomach stomach
49 chr19:55895800-55896800 Flanking Active TSS Fetal Thymus thymus
50 chr19:55895800-55896800 Flanking Active TSS Rectal Mucosa Donor 29 rectum

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