Variant report

Variant rs3811434
Chromosome Location chr1:46049251-46049252
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46048600-46051000 Active TSS Colonic Mucosa Colon
2 chr1:46048800-46049400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
3 chr1:46048800-46049400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
4 chr1:46048800-46049600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
5 chr1:46048800-46049600 Flanking Active TSS Liver Liver
6 chr1:46048800-46049800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:46048800-46050400 Active TSS iPS-20b Cell Line embryonic stem cell
8 chr1:46048800-46050600 Active TSS HUES6 Cell Line embryonic stem cell
9 chr1:46048800-46050600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr1:46048800-46050600 Active TSS Brain Anterior Caudate brain
11 chr1:46048800-46050600 Active TSS Brain Cingulate Gyrus brain
12 chr1:46048800-46050600 Active TSS Left Ventricle heart
13 chr1:46048800-46050600 Active TSS Skeletal Muscle Male skeletal muscle
14 chr1:46048800-46050600 Active TSS NHEK skin
15 chr1:46048800-46050800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:46048800-46050800 Active TSS Muscle Satellite Cultured Cells --
17 chr1:46048800-46050800 Active TSS Brain Germinal Matrix brain
18 chr1:46048800-46050800 Active TSS Brain Hippocampus Middle brain
19 chr1:46048800-46050800 Active TSS Brain Inferior Temporal Lobe brain
20 chr1:46048800-46050800 Active TSS Fetal Brain Female brain
21 chr1:46048800-46050800 Active TSS Rectal Smooth Muscle rectum
22 chr1:46048800-46050800 Active TSS HSMMtube muscle
23 chr1:46048800-46050800 Active TSS K562 blood
24 chr1:46048800-46050800 Active TSS NH-A brain
25 chr1:46048800-46051000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:46048800-46051000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:46048800-46051000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:46048800-46051000 Active TSS Breast Myoepithelial Primary Cells Breast
29 chr1:46048800-46051000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
30 chr1:46048800-46051000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
31 chr1:46048800-46051000 Active TSS Fetal Stomach stomach
32 chr1:46048800-46051000 Active TSS Psoas Muscle Psoas
33 chr1:46048800-46051000 Active TSS Hela-S3 cervix
34 chr1:46048800-46051000 Active TSS HSMM muscle
35 chr1:46048800-46051000 Active TSS NHLF lung
36 chr1:46048800-46051200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
37 chr1:46048800-46051200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:46048800-46051200 Active TSS Fetal Kidney kidney
39 chr1:46048800-46051200 Active TSS Right Ventricle heart
40 chr1:46048800-46051200 Active TSS NHDF-Ad bronchial
41 chr1:46048800-46051400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
42 chr1:46048800-46051800 Active TSS ES-I3 Cell Line embryonic stem cell
43 chr1:46048800-46051800 Active TSS H1 Cell Line embryonic stem cell
44 chr1:46048800-46052200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr1:46048800-46052200 Active TSS iPS-18 Cell Line embryonic stem cell
46 chr1:46048800-46052400 Active TSS iPS-15b Cell Line embryonic stem cell
47 chr1:46048800-46052600 Active TSS HUES48 Cell Line embryonic stem cell
48 chr1:46048800-46052600 Active TSS HUES64 Cell Line embryonic stem cell
49 chr1:46048800-46052800 Active TSS H9 Cell Line embryonic stem cell
50 chr1:46049000-46049400 Flanking Active TSS Colon Smooth Muscle Colon

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