Variant report

Variant rs3820911
Chromosome Location chr2:33520715-33520716
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33492400-33547400 Weak transcription Fetal Intestine Small intestine
2 chr2:33501200-33528800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr2:33502600-33537000 Weak transcription Fetal Intestine Large intestine
4 chr2:33505000-33526200 Weak transcription Placenta Placenta
5 chr2:33507000-33528600 Weak transcription Fetal Muscle Trunk muscle
6 chr2:33516400-33522000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr2:33517000-33521400 Weak transcription Right Atrium heart
8 chr2:33517000-33522000 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr2:33517000-33522000 Weak transcription Fetal Muscle Leg muscle
10 chr2:33517000-33522000 Weak transcription Left Ventricle heart
11 chr2:33517000-33522800 Weak transcription K562 blood
12 chr2:33517000-33524600 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr2:33517000-33525400 Weak transcription Right Ventricle heart
14 chr2:33517000-33526600 Weak transcription Fetal Stomach stomach
15 chr2:33517000-33528800 Weak transcription Psoas Muscle Psoas
16 chr2:33517000-33529200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr2:33517000-33529400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr2:33517000-33529600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr2:33517200-33522200 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr2:33517200-33522800 Weak transcription HSMMtube muscle
21 chr2:33517200-33525800 Weak transcription Liver Liver
22 chr2:33517200-33533000 Weak transcription Brain Substantia Nigra brain
23 chr2:33517200-33533200 Weak transcription Brain Inferior Temporal Lobe brain
24 chr2:33517200-33537400 Weak transcription Fetal Brain Male brain
25 chr2:33517200-33545000 Weak transcription Fetal Kidney kidney
26 chr2:33517200-33545800 Weak transcription Fetal Lung lung
27 chr2:33517200-33546400 Weak transcription Brain Angular Gyrus brain
28 chr2:33517600-33520800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr2:33517600-33532600 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr2:33517600-33532800 Weak transcription Brain Anterior Caudate brain
31 chr2:33517800-33543400 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr2:33518200-33522000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr2:33518200-33522000 Weak transcription Colon Smooth Muscle Colon
34 chr2:33518400-33520800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr2:33518400-33521000 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr2:33518400-33521000 Weak transcription NHLF lung
37 chr2:33518400-33522800 Weak transcription NHDF-Ad bronchial
38 chr2:33518600-33520800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr2:33518600-33521000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr2:33518600-33521400 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr2:33518600-33521600 Weak transcription Ovary ovary
42 chr2:33518600-33521600 Strong transcription Osteobl bone
43 chr2:33518600-33521800 Weak transcription HUVEC blood vessel
44 chr2:33518600-33522000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr2:33518600-33522000 Weak transcription Rectal Smooth Muscle rectum
46 chr2:33519000-33521000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr2:33519200-33520800 Weak transcription Fetal Heart heart
48 chr2:33519600-33520800 Weak transcription Stomach Smooth Muscle stomach
49 chr2:33520400-33521400 Strong transcription Muscle Satellite Cultured Cells --
50 chr2:33520400-33521400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain

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