Variant report

Variant rs3822469
Chromosome Location chr5:36645367-36645368
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:36616800-36651200 Weak transcription Psoas Muscle Psoas
2 chr5:36630800-36646200 Weak transcription NHDF-Ad bronchial
3 chr5:36631000-36654400 Weak transcription H1 Cell Line embryonic stem cell
4 chr5:36632200-36654800 Weak transcription Fetal Brain Female brain
5 chr5:36632600-36651800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr5:36632600-36654600 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr5:36634000-36652200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr5:36635600-36654200 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr5:36635800-36652200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr5:36637200-36646400 Weak transcription Monocytes-CD14+_RO01746 blood
11 chr5:36637200-36655200 Weak transcription Hela-S3 cervix
12 chr5:36637400-36646600 Weak transcription Brain Angular Gyrus brain
13 chr5:36637400-36654600 Weak transcription Left Ventricle heart
14 chr5:36637800-36648400 Enhancers Fetal Heart heart
15 chr5:36638600-36646600 Weak transcription Brain Substantia Nigra brain
16 chr5:36638600-36652000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr5:36638600-36652200 Weak transcription NHEK skin
18 chr5:36638600-36654600 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr5:36638800-36646600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr5:36638800-36646600 Weak transcription Placenta Placenta
21 chr5:36638800-36654400 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr5:36639000-36645400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr5:36639200-36646600 Weak transcription Placenta Amnion Placenta Amnion
24 chr5:36639400-36646400 Weak transcription Brain Anterior Caudate brain
25 chr5:36639400-36650200 Weak transcription Brain Hippocampus Middle brain
26 chr5:36639600-36651800 Weak transcription Adipose Nuclei Adipose
27 chr5:36639800-36651400 Weak transcription Brain Inferior Temporal Lobe brain
28 chr5:36639800-36656400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr5:36640400-36651200 Weak transcription Fetal Muscle Leg muscle
30 chr5:36640800-36650000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr5:36641600-36646000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr5:36641600-36646600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr5:36641600-36649800 Weak transcription Brain Cingulate Gyrus brain
34 chr5:36642200-36649600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr5:36642600-36646200 Weak transcription Fetal Lung lung
36 chr5:36643000-36646600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr5:36644800-36645400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr5:36644800-36645600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr5:36644800-36645600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr5:36645000-36646800 Genic enhancers HSMM muscle
41 chr5:36645200-36645400 Enhancers Fetal Intestine Large intestine
42 chr5:36645200-36646000 Weak transcription HSMMtube muscle
43 chr5:36645200-36646200 Weak transcription NH-A brain
44 chr5:36645200-36646200 Weak transcription Osteobl bone
45 chr5:36645200-36646600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr5:36645200-36649400 Genic enhancers Cortex derived primary cultured neurospheres brain
47 chr5:36645200-36653000 Weak transcription Right Ventricle heart
48 chr5:36645200-36654400 Weak transcription ES-I3 Cell Line embryonic stem cell

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