The 2.0 version of rSNPBase

Variant report

Variant rs3822762
Chromosome Location chr5:9120200-9120201
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:9040800-9122000 Weak transcription Colonic Mucosa Colon
2 chr5:9105200-9120400 Weak transcription Brain Inferior Temporal Lobe brain
3 chr5:9105200-9145000 Weak transcription Osteobl bone
4 chr5:9108000-9123200 Weak transcription Brain Hippocampus Middle brain
5 chr5:9108400-9135800 Weak transcription Duodenum Mucosa Duodenum
6 chr5:9108600-9131800 Weak transcription NHLF lung
7 chr5:9108800-9147600 Weak transcription NHDF-Ad bronchial
8 chr5:9112800-9126800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr5:9115000-9123200 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr5:9116000-9144600 Weak transcription Fetal Kidney kidney
11 chr5:9116200-9124000 Strong transcription Breast Myoepithelial Primary Cells Breast
12 chr5:9116200-9124000 Weak transcription Pancreas Pancrea
13 chr5:9116400-9121200 Weak transcription Placenta Amnion Placenta Amnion
14 chr5:9117400-9135600 Weak transcription Liver Liver
15 chr5:9117600-9136400 Weak transcription Fetal Heart heart
16 chr5:9117600-9144600 Weak transcription Fetal Lung lung
17 chr5:9119200-9120600 Weak transcription Spleen Spleen
18 chr5:9119200-9122200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr5:9119200-9124000 Weak transcription Gastric stomach
20 chr5:9119200-9135000 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr5:9119200-9153200 Weak transcription Fetal Intestine Large intestine
22 chr5:9119400-9121400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr5:9119400-9121400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr5:9119400-9122600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr5:9119400-9122600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr5:9119400-9123600 Weak transcription Fetal Stomach stomach
27 chr5:9119400-9124000 Weak transcription Esophagus oesophagus
28 chr5:9119400-9124000 Weak transcription Fetal Muscle Trunk muscle
29 chr5:9119400-9124000 Weak transcription Ovary ovary
30 chr5:9119400-9124200 Weak transcription Aorta Aorta
31 chr5:9119400-9126000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr5:9119400-9126400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr5:9119400-9130600 Weak transcription Fetal Muscle Leg muscle
34 chr5:9119400-9134200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr5:9119400-9136000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr5:9119400-9136000 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr5:9119400-9136400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr5:9119400-9144600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr5:9119400-9144600 Weak transcription Fetal Intestine Small intestine
40 chr5:9119400-9151800 Weak transcription Left Ventricle heart
41 chr5:9119400-9152000 Weak transcription Right Ventricle heart
42 chr5:9119400-9152000 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr5:9119600-9121200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr5:9119600-9121400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr5:9119600-9131800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr5:9119600-9144800 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015