Variant report

Variant	rs3824186
Chromosome Location	chr8:2029742-2029743
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1043221	1.00[CHB][hapmap]
rs1043225	1.00[CHB][hapmap]
rs1043226	1.00[CHB][hapmap]
rs11136467	1.00[CHB][hapmap]
rs13257924	1.00[CHB][hapmap]
rs13276575	1.00[CHB][hapmap]
rs14375	1.00[CHB][hapmap]
rs4598291	1.00[CHB][hapmap]
rs6558566	1.00[CHB][hapmap]
rs6984792	1.00[CHB][hapmap]
rs7015556	1.00[CHB][hapmap]
rs7386016	1.00[CHB][hapmap]
rs7386994	1.00[CHB][hapmap]
rs9644316	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889712	chr8:1591412-2337777	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:2023600-2060800	Weak transcription	Spleen	Spleen
2	chr8:2023600-2067000	Weak transcription	Right Atrium	heart
3	chr8:2023800-2032000	Weak transcription	Fetal Thymus	thymus
4	chr8:2025000-2049200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr8:2026600-2029800	Genic enhancers	Skeletal Muscle Female	skeletal muscle
6	chr8:2027600-2038400	Strong transcription	Skeletal Muscle Male	skeletal muscle
7	chr8:2027800-2031400	Weak transcription	Fetal Muscle Leg	muscle
8	chr8:2027800-2032000	Weak transcription	Fetal Brain Male	brain
9	chr8:2027800-2032200	Weak transcription	Fetal Muscle Trunk	muscle
10	chr8:2027800-2048200	Weak transcription	Psoas Muscle	Psoas
11	chr8:2028000-2034200	Weak transcription	Fetal Heart	heart
12	chr8:2028800-2030200	Enhancers	Left Ventricle	heart
13	chr8:2029000-2044000	Weak transcription	Right Ventricle	heart
14	chr8:2029600-2030000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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