Variant report

Variant rs3824319
Chromosome Location chr8:19221997-19221998
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:19173600-19254800 Weak transcription Colonic Mucosa Colon
2 chr8:19174000-19223600 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr8:19186200-19229800 Weak transcription Rectal Smooth Muscle rectum
4 chr8:19195600-19231200 Weak transcription Stomach Smooth Muscle stomach
5 chr8:19206600-19223800 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr8:19208400-19231200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr8:19211400-19224600 Strong transcription A549 lung
8 chr8:19214400-19266200 Weak transcription Aorta Aorta
9 chr8:19215400-19245800 Weak transcription Left Ventricle heart
10 chr8:19215400-19247800 Weak transcription Fetal Kidney kidney
11 chr8:19216600-19223800 Weak transcription Esophagus oesophagus
12 chr8:19216600-19243800 Weak transcription Pancreas Pancrea
13 chr8:19217400-19230000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr8:19217600-19225800 Weak transcription Fetal Lung lung
15 chr8:19217800-19224800 Strong transcription Duodenum Mucosa Duodenum
16 chr8:19218400-19222600 Strong transcription HepG2 liver
17 chr8:19218600-19223800 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr8:19218800-19225800 Strong transcription Liver Liver
19 chr8:19219000-19223000 Strong transcription Adipose Nuclei Adipose
20 chr8:19219200-19223600 Strong transcription Fetal Intestine Small intestine
21 chr8:19219400-19222200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr8:19219400-19223400 Strong transcription Gastric stomach
23 chr8:19219400-19224400 Strong transcription Fetal Intestine Large intestine
24 chr8:19220000-19223000 Weak transcription Hela-S3 cervix
25 chr8:19220000-19223200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr8:19220400-19222000 Enhancers Muscle Satellite Cultured Cells --
27 chr8:19220400-19222200 Enhancers HSMM muscle
28 chr8:19220400-19224200 Strong transcription Ovary ovary
29 chr8:19220600-19222000 Strong transcription Fetal Stomach stomach
30 chr8:19220800-19224000 Strong transcription Rectal Mucosa Donor 31 rectum
31 chr8:19221000-19222000 Strong transcription Stomach Mucosa stomach
32 chr8:19221000-19222000 Strong transcription NHLF lung
33 chr8:19221200-19222000 Strong transcription Placenta Amnion Placenta Amnion
34 chr8:19221200-19222000 Strong transcription Rectal Mucosa Donor 29 rectum
35 chr8:19221400-19222000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr8:19221400-19222400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr8:19221400-19223000 Strong transcription NHDF-Ad bronchial
38 chr8:19221400-19226400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr8:19221400-19226800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr8:19221600-19222000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr8:19221600-19222400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr8:19221600-19224000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr8:19221600-19243800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr8:19221800-19222000 Enhancers Primary hematopoietic stem cells short term culture blood
45 chr8:19221800-19222600 Weak transcription Osteobl bone
46 chr8:19221800-19223000 Weak transcription Fetal Muscle Leg muscle
47 chr8:19221800-19225800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr8:19221800-19231000 Weak transcription Lung lung
49 chr8:19221800-19231200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr8:19221800-19231200 Weak transcription Placenta Placenta

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