Variant report

Variant rs3828241
Chromosome Location chr2:56119720-56119721
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:56109800-56120000 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
2 chr2:56115400-56120000 Enhancers Hela-S3 cervix
3 chr2:56115400-56125800 Weak transcription HSMMtube muscle
4 chr2:56115400-56128800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr2:56116400-56125800 Weak transcription Placenta Amnion Placenta Amnion
6 chr2:56116400-56128600 Weak transcription Ovary ovary
7 chr2:56116400-56128800 Weak transcription Placenta Placenta
8 chr2:56116400-56128800 Weak transcription Pancreas Pancrea
9 chr2:56116400-56144400 Weak transcription Lung lung
10 chr2:56116600-56120600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr2:56116600-56121600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr2:56116600-56128200 Weak transcription Muscle Satellite Cultured Cells --
13 chr2:56116600-56128200 Weak transcription HMEC breast
14 chr2:56116600-56131000 Weak transcription Adipose Nuclei Adipose
15 chr2:56118400-56120000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr2:56118600-56120600 Genic enhancers Osteobl bone
17 chr2:56118600-56121000 Strong transcription HSMM muscle
18 chr2:56118800-56119800 Enhancers Fetal Lung lung
19 chr2:56119000-56119800 Enhancers NH-A brain
20 chr2:56119000-56120200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr2:56119000-56128200 Weak transcription A549 lung
22 chr2:56119200-56121800 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr2:56119400-56119800 Enhancers Aorta Aorta
24 chr2:56119400-56122000 Weak transcription NHEK skin
25 chr2:56119400-56126000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr2:56119400-56126800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr2:56119400-56126800 Weak transcription NHLF lung
28 chr2:56119600-56119800 Enhancers Fetal Adrenal Gland Adrenal Gland
29 chr2:56119600-56120000 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr2:56119600-56122000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr2:56119600-56136400 Genic enhancers HUVEC blood vessel

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