Variant report

Variant rs3839244
Chromosome Location chr5:118838230-118838231
allele -/GCT
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118791800-118846600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:118794800-118861200 Weak transcription HSMM muscle
3 chr5:118804200-118879600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr5:118805200-118839400 Weak transcription NHEK skin
5 chr5:118806000-118846400 Weak transcription Esophagus oesophagus
6 chr5:118806000-118846400 Weak transcription Spleen Spleen
7 chr5:118806200-118844800 Weak transcription Thymus Thymus
8 chr5:118806200-118846400 Weak transcription Pancreas Pancrea
9 chr5:118806200-118855600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr5:118806400-118845000 Weak transcription Fetal Stomach stomach
11 chr5:118806400-118846400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr5:118806800-118845400 Weak transcription Fetal Heart heart
13 chr5:118808000-118839600 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr5:118808000-118839800 Weak transcription Psoas Muscle Psoas
15 chr5:118811200-118839600 Weak transcription Brain Germinal Matrix brain
16 chr5:118812000-118846400 Weak transcription NHLF lung
17 chr5:118814000-118845000 Weak transcription Gastric stomach
18 chr5:118814000-118845200 Weak transcription Aorta Aorta
19 chr5:118814800-118839400 Weak transcription Right Ventricle heart
20 chr5:118814800-118844800 Weak transcription Lung lung
21 chr5:118815400-118839000 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr5:118815800-118839000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr5:118815800-118845400 Weak transcription HMEC breast
24 chr5:118816000-118844000 Weak transcription Hela-S3 cervix
25 chr5:118816000-118847000 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr5:118816800-118839600 Strong transcription Adipose Nuclei Adipose
27 chr5:118817000-118846400 Strong transcription Primary monocytes fromperipheralblood blood
28 chr5:118817200-118839600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr5:118818400-118839600 Weak transcription Fetal Kidney kidney
30 chr5:118819000-118839200 Weak transcription H9 Cell Line embryonic stem cell
31 chr5:118819600-118844400 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr5:118820000-118839000 Strong transcription HUES64 Cell Line embryonic stem cell
33 chr5:118820000-118839600 Strong transcription HUES48 Cell Line embryonic stem cell
34 chr5:118820200-118838600 Strong transcription iPS-20b Cell Line embryonic stem cell
35 chr5:118820200-118846400 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr5:118820400-118838800 Strong transcription HUES6 Cell Line embryonic stem cell
37 chr5:118821000-118839600 Strong transcription Liver Liver
38 chr5:118821000-118843800 Weak transcription NHDF-Ad bronchial
39 chr5:118824200-118838400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr5:118827600-118847800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr5:118828000-118840400 Weak transcription Osteobl bone
42 chr5:118829200-118840200 Strong transcription Primary T helper cells fromperipheralblood blood
43 chr5:118829600-118839600 Strong transcription Duodenum Mucosa Duodenum
44 chr5:118829800-118844800 Weak transcription Rectal Smooth Muscle rectum
45 chr5:118830400-118845200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr5:118831000-118840200 Strong transcription Primary T helper cells PMA-I stimulated --
47 chr5:118832400-118839600 Weak transcription Muscle Satellite Cultured Cells --
48 chr5:118832400-118878200 Weak transcription NH-A brain
49 chr5:118832600-118844400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr5:118832600-118868600 Weak transcription Placenta Amnion Placenta Amnion

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