Variant report
| Variant | rs3842281 |
|---|---|
| Chromosome Location | chr12:49523523-49523524 |
| allele | A/C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:49519200-49523600 | Weak transcription | Psoas Muscle | Psoas |
| 2 | chr12:49519600-49523600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 3 | chr12:49520800-49523600 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 4 | chr12:49520800-49523600 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 5 | chr12:49520800-49523600 | Strong transcription | Placenta Amnion | Placenta Amnion |
| 6 | chr12:49521000-49523600 | Strong transcription | ES-I3 Cell Line | embryonic stem cell |
| 7 | chr12:49521000-49523600 | Strong transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr12:49521200-49523600 | Strong transcription | Liver | Liver |
| 9 | chr12:49521200-49523800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 10 | chr12:49521600-49523600 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 11 | chr12:49522000-49524200 | Weak transcription | Ovary | ovary |
| 12 | chr12:49522400-49523800 | Strong transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 13 | chr12:49522600-49523600 | Genic enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 14 | chr12:49522600-49524400 | Transcr. at gene 5' and 3' | Hela-S3 | cervix |
| 15 | chr12:49522800-49523600 | Strong transcription | iPS-15b Cell Line | embryonic stem cell |
| 16 | chr12:49522800-49523600 | Genic enhancers | Primary monocytes fromperipheralblood | blood |
| 17 | chr12:49522800-49523600 | Genic enhancers | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 18 | chr12:49522800-49523600 | Genic enhancers | Fetal Heart | heart |
| 19 | chr12:49522800-49523600 | Genic enhancers | Fetal Lung | lung |
| 20 | chr12:49522800-49523800 | Genic enhancers | Primary B cells from peripheral blood | blood |
| 21 | chr12:49522800-49523800 | Transcr. at gene 5' and 3' | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 22 | chr12:49522800-49523800 | Strong transcription | Gastric | stomach |
| 23 | chr12:49522800-49524000 | Transcr. at gene 5' and 3' | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 24 | chr12:49522800-49524000 | Transcr. at gene 5' and 3' | GM12878-XiMat | blood |
| 25 | chr12:49522800-49524400 | Transcr. at gene 5' and 3' | Primary T helper cells PMA-I stimulated | -- |
| 26 | chr12:49522800-49524400 | Transcr. at gene 5' and 3' | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 27 | chr12:49522800-49524400 | Transcr. at gene 5' and 3' | HMEC | breast |
| 28 | chr12:49522800-49524400 | Transcr. at gene 5' and 3' | Osteobl | bone |
| 29 | chr12:49522800-49524600 | Transcr. at gene 5' and 3' | Primary hematopoietic stem cells short term culture | blood |
| 30 | chr12:49522800-49524600 | Transcr. at gene 5' and 3' | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 31 | chr12:49522800-49524600 | Transcr. at gene 5' and 3' | NH-A | brain |
| 32 | chr12:49522800-49524800 | Transcr. at gene 5' and 3' | A549 | lung |
| 33 | chr12:49522800-49525200 | Transcr. at gene 5' and 3' | Dnd41 | blood |
| 34 | chr12:49523000-49523600 | Genic enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 35 | chr12:49523000-49523600 | Genic enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 36 | chr12:49523000-49523600 | Strong transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 37 | chr12:49523000-49523600 | Genic enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 38 | chr12:49523000-49523600 | Transcr. at gene 5' and 3' | Duodenum Mucosa | Duodenum |
| 39 | chr12:49523000-49523600 | Genic enhancers | Esophagus | oesophagus |
| 40 | chr12:49523000-49523600 | Genic enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 41 | chr12:49523000-49523600 | Genic enhancers | Fetal Muscle Leg | muscle |
| 42 | chr12:49523000-49523600 | Genic enhancers | Left Ventricle | heart |
| 43 | chr12:49523000-49523600 | Genic enhancers | Lung | lung |
| 44 | chr12:49523000-49523600 | Enhancers | Right Atrium | heart |
| 45 | chr12:49523000-49523600 | Genic enhancers | Sigmoid Colon | Sigmoid Colon |
| 46 | chr12:49523000-49523600 | Genic enhancers | Stomach Smooth Muscle | stomach |
| 47 | chr12:49523000-49523800 | Genic enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 48 | chr12:49523000-49523800 | Transcr. at gene 5' and 3' | Breast Myoepithelial Primary Cells | Breast |
| 49 | chr12:49523000-49523800 | Genic enhancers | Pancreas | Pancrea |
| 50 | chr12:49523000-49523800 | Genic enhancers | Spleen | Spleen |
