Variant report

Variant	rs384432
Chromosome Location	chr19:44452935-44452936
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs364378	0.87[AMR][1000 genomes]
rs364693	0.87[AMR][1000 genomes]
rs365769	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs367056	0.89[AMR][1000 genomes]
rs367241	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs373043	0.89[AMR][1000 genomes]
rs376769	0.87[AMR][1000 genomes]
rs379722	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs382715	0.87[AMR][1000 genomes]
rs393403	0.83[AFR][1000 genomes]
rs393473	0.83[AFR][1000 genomes]
rs395143	0.87[AMR][1000 genomes]
rs424364	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs441225	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs442934	0.89[AMR][1000 genomes]
rs446072	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs452143	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs453611	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs461374	0.87[AMR][1000 genomes]
rs465860	0.87[AMR][1000 genomes]
rs8101844	0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv469650	chr19:44405994-44555426	Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
2	nsv579854	chr19:44411543-44490024	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:44451400-44454200	ZNF genes & repeats	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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