Variant report

Variant rs3847699
Chromosome Location chr12:57915807-57915808
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:57912000-57917600 Active TSS Psoas Muscle Psoas
2 chr12:57912400-57918600 Active TSS Pancreatic Islets Pancreatic Islet
3 chr12:57913800-57917400 Active TSS ES-I3 Cell Line embryonic stem cell
4 chr12:57914200-57916000 Weak transcription Small Intestine intestine
5 chr12:57914400-57916000 Weak transcription Gastric stomach
6 chr12:57914400-57916000 Weak transcription Ovary ovary
7 chr12:57914600-57916200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
8 chr12:57914600-57916200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
9 chr12:57914600-57916200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
10 chr12:57914600-57916400 Flanking Active TSS Primary T cells fromperipheralblood blood
11 chr12:57914600-57916400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
12 chr12:57914600-57916400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr12:57914600-57916400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr12:57914600-57916400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
15 chr12:57914800-57916000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr12:57914800-57916200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr12:57914800-57916200 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
18 chr12:57914800-57916200 Flanking Active TSS Primary B cells from cord blood blood
19 chr12:57914800-57916200 Flanking Active TSS Primary T cells from cord blood blood
20 chr12:57914800-57916200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
21 chr12:57914800-57916200 Flanking Active TSS Adipose Nuclei Adipose
22 chr12:57914800-57916200 Flanking Active TSS Brain Hippocampus Middle brain
23 chr12:57914800-57916200 Flanking Active TSS Colon Smooth Muscle Colon
24 chr12:57914800-57916200 Flanking Active TSS Fetal Heart heart
25 chr12:57914800-57916200 Flanking Active TSS Rectal Smooth Muscle rectum
26 chr12:57914800-57916200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
27 chr12:57914800-57916200 Flanking Active TSS K562 blood
28 chr12:57914800-57916400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
29 chr12:57914800-57916400 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
30 chr12:57914800-57916400 Flanking Active TSS Fetal Intestine Large intestine
31 chr12:57914800-57916400 Flanking Active TSS Stomach Smooth Muscle stomach
32 chr12:57914800-57916400 Flanking Active TSS Dnd41 blood
33 chr12:57914800-57916400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
34 chr12:57915000-57916000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr12:57915000-57916000 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
36 chr12:57915000-57916000 Enhancers Placenta Placenta
37 chr12:57915000-57916000 Enhancers Sigmoid Colon Sigmoid Colon
38 chr12:57915000-57916200 Flanking Active TSS H1 Cell Line embryonic stem cell
39 chr12:57915000-57916200 Flanking Active TSS Brain Anterior Caudate brain
40 chr12:57915000-57916200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
41 chr12:57915000-57916400 Flanking Active TSS Fetal Brain Female brain
42 chr12:57915200-57916000 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr12:57915200-57916000 Flanking Active TSS HUES48 Cell Line embryonic stem cell
44 chr12:57915200-57916000 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
45 chr12:57915200-57916000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr12:57915200-57916000 Flanking Active TSS Brain Substantia Nigra brain
47 chr12:57915200-57916000 Enhancers Esophagus oesophagus
48 chr12:57915200-57916000 Enhancers Spleen Spleen
49 chr12:57915200-57916200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
50 chr12:57915200-57916200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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