The 2.0 version of rSNPBase

Variant report

Variant rs3850961
Chromosome Location chr12:30780954-30780955
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:30767000-30784800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr12:30767000-30785600 Weak transcription Pancreas Pancrea
3 chr12:30767000-30844200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr12:30770600-30783400 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr12:30770800-30783200 Weak transcription Fetal Stomach stomach
6 chr12:30771000-30781600 Weak transcription Fetal Brain Female brain
7 chr12:30771000-30812200 Weak transcription Aorta Aorta
8 chr12:30771200-30804200 Weak transcription Fetal Brain Male brain
9 chr12:30771400-30781200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr12:30771400-30783000 Weak transcription Brain Germinal Matrix brain
11 chr12:30771400-30783000 Weak transcription Brain Inferior Temporal Lobe brain
12 chr12:30771400-30783000 Weak transcription HSMMtube muscle
13 chr12:30772800-30783400 Weak transcription A549 lung
14 chr12:30774200-30781200 Weak transcription Brain Substantia Nigra brain
15 chr12:30774600-30812000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr12:30775000-30781200 Weak transcription Primary B cells from cord blood blood
17 chr12:30775000-30781200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr12:30775000-30781600 Weak transcription HUVEC blood vessel
19 chr12:30775200-30783400 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr12:30775400-30781200 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr12:30775600-30781200 Weak transcription Rectal Smooth Muscle rectum
22 chr12:30775600-30781200 Weak transcription NHLF lung
23 chr12:30775600-30781400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr12:30775600-30781600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr12:30775600-30815400 Weak transcription Right Ventricle heart
26 chr12:30775800-30781200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr12:30775800-30781200 Weak transcription Adipose Nuclei Adipose
28 chr12:30775800-30783000 Weak transcription HSMM muscle
29 chr12:30775800-30784800 Weak transcription GM12878-XiMat blood
30 chr12:30775800-30813200 Weak transcription HMEC breast
31 chr12:30775800-30815200 Weak transcription NHEK skin
32 chr12:30776000-30781200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr12:30776000-30782800 Weak transcription NHDF-Ad bronchial
34 chr12:30776000-30783600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr12:30776000-30808400 Weak transcription Muscle Satellite Cultured Cells --
36 chr12:30776200-30781000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr12:30776200-30783600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr12:30776600-30781400 Weak transcription Brain Hippocampus Middle brain
39 chr12:30776800-30781200 Weak transcription Primary B cells from peripheral blood blood
40 chr12:30776800-30781200 Weak transcription Duodenum Mucosa Duodenum
41 chr12:30776800-30783200 Weak transcription Ovary ovary
42 chr12:30776800-30791000 Weak transcription Psoas Muscle Psoas
43 chr12:30777000-30782200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr12:30777200-30781200 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr12:30777200-30783200 Weak transcription Lung lung
46 chr12:30777200-30783600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr12:30777800-30783000 Weak transcription Placenta Placenta
48 chr12:30778000-30786400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr12:30778400-30781200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr12:30778600-30781200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015