Variant report

Variant	rs385256
Chromosome Location	chr9:71120734-71120735
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:71115432..71117272-chr9:71118792..71122258,3	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs1532235	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs265084	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs265086	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427847	chr9:70318730-71153527	Weak transcription Bivalent/Poised TSS Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:71102200-71121000	Weak transcription	Fetal Kidney	kidney
2	chr9:71103600-71122000	Weak transcription	Ovary	ovary
3	chr9:71115600-71121400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr9:71116200-71124000	Weak transcription	Fetal Muscle Trunk	muscle
5	chr9:71116400-71122000	Weak transcription	HSMMtube	muscle
6	chr9:71116600-71122000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr9:71116800-71120800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr9:71116800-71122000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr9:71117000-71129600	Weak transcription	NHLF	lung
10	chr9:71117400-71122200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr9:71117600-71123600	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr9:71117600-71142800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
13	chr9:71119200-71122600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr9:71120000-71120800	Genic enhancers	Colon Smooth Muscle	Colon
15	chr9:71120200-71121000	Genic enhancers	Fetal Stomach	stomach
16	chr9:71120200-71121200	Enhancers	Right Ventricle	heart
17	chr9:71120200-71121600	Enhancers	Duodenum Smooth Muscle	Duodenum
18	chr9:71120200-71123000	Enhancers	Fetal Muscle Leg	muscle
19	chr9:71120200-71124600	Enhancers	Rectal Smooth Muscle	rectum
20	chr9:71120400-71120800	Enhancers	Aorta	Aorta
21	chr9:71120400-71120800	Genic enhancers	Fetal Lung	lung
22	chr9:71120400-71121000	Enhancers	Left Ventricle	heart
23	chr9:71120400-71121000	Enhancers	Psoas Muscle	Psoas
24	chr9:71120400-71121200	Enhancers	Right Atrium	heart
25	chr9:71120400-71122400	Enhancers	Primary monocytes fromperipheralblood	blood
26	chr9:71120400-71123000	Enhancers	Fetal Heart	heart
27	chr9:71120600-71120800	Enhancers	Gastric	stomach
28	chr9:71120600-71121000	Enhancers	Fetal Intestine Large	intestine
29	chr9:71120600-71121200	Enhancers	Skeletal Muscle Female	skeletal muscle
30	chr9:71120600-71121200	Enhancers	GM12878-XiMat	blood
31	chr9:71120600-71121200	Enhancers	HepG2	liver
32	chr9:71120600-71121200	Enhancers	Monocytes-CD14+_RO01746	blood
33	chr9:71120600-71121400	Enhancers	Adipose Nuclei	Adipose
34	chr9:71120600-71121400	Enhancers	Stomach Mucosa	stomach
35	chr9:71120600-71122400	Enhancers	Rectal Mucosa Donor 31	rectum
36	chr9:71120600-71123600	Enhancers	Stomach Smooth Muscle	stomach
37	chr9:71120600-71124200	Enhancers	Liver	Liver

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