Variant report

Variant	rs3861631
Chromosome Location	chr14:78532513-78532514
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs3952582	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs61651338	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73321008	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73321023	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73321025	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73321032	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73321033	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902108	chr14:78459047-78541015	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78529200-78547400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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