Variant report

Variant	rs386717200
Chromosome Location	chr7:118744450-118744451
allele	AAT/GAC
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889098	chr7:118590050-118896639	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv1825159	chr7:118640865-118842361	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv889099	chr7:118709754-118868426	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv528448	chr7:118733415-118744450	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv889100	chr7:118744450-119247571	Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:118740600-118747600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:118741000-118745600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr7:118742000-118744800	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr7:118743200-118744800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr7:118743600-118744600	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr7:118743600-118744800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr7:118743600-118745600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr7:118743800-118745600	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr7:118743800-118745600	Weak transcription	Fetal Lung	lung
10	chr7:118743800-118745800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr7:118743800-118747200	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr7:118744000-118745400	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr7:118744200-118745000	Enhancers	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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