Variant report

Variant rs3885972
Chromosome Location chr5:36419967-36419968
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:36415600-36422600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
2 chr5:36415600-36423000 Weak transcription Fetal Kidney kidney
3 chr5:36415600-36423200 Weak transcription Brain Anterior Caudate brain
4 chr5:36416200-36420400 Enhancers K562 blood
5 chr5:36416600-36420000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr5:36416800-36423600 Weak transcription Fetal Muscle Leg muscle
7 chr5:36417000-36420200 Enhancers Stomach Mucosa stomach
8 chr5:36417200-36420200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr5:36417400-36420400 Enhancers Fetal Intestine Small intestine
10 chr5:36418200-36420200 Bivalent Enhancer H1 Cell Line embryonic stem cell
11 chr5:36418200-36420200 Enhancers Duodenum Mucosa Duodenum
12 chr5:36418600-36420000 Enhancers Liver Liver
13 chr5:36418600-36420200 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
14 chr5:36418600-36420200 Bivalent Enhancer iPS-20b Cell Line embryonic stem cell
15 chr5:36418800-36420200 Enhancers Hela-S3 cervix
16 chr5:36418800-36422400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr5:36418800-36423000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr5:36419000-36422800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr5:36419000-36423000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr5:36419200-36420200 Enhancers Primary hematopoietic stem cells blood
21 chr5:36419200-36420200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr5:36419200-36422600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr5:36419200-36422600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr5:36419400-36420000 Enhancers Primary hematopoietic stem cells short term culture blood
25 chr5:36419400-36420200 Enhancers Primary T cells from cord blood blood
26 chr5:36419400-36420200 Enhancers Fetal Thymus thymus
27 chr5:36419400-36420400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr5:36419600-36420000 Enhancers Small Intestine intestine
29 chr5:36419600-36420200 Enhancers Primary Natural Killer cells fromperipheralblood blood
30 chr5:36419600-36420200 Enhancers GM12878-XiMat blood
31 chr5:36419800-36420200 Active TSS Fetal Intestine Large intestine
32 chr5:36419800-36420400 Enhancers Cortex derived primary cultured neurospheres brain
33 chr5:36419800-36422800 Weak transcription NHEK skin
34 chr5:36419800-36430200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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