Variant report

Variant rs3890760
Chromosome Location chr2:234098802-234098803
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234053800-234110800 Strong transcription Primary T helper naive cells fromperipheralblood blood
2 chr2:234053800-234113800 Strong transcription Primary T cells from cord blood blood
3 chr2:234053800-234118000 Strong transcription Primary T regulatory cells fromperipheralblood blood
4 chr2:234054400-234110600 Weak transcription Small Intestine intestine
5 chr2:234055200-234113400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr2:234058600-234105400 Weak transcription Rectal Smooth Muscle rectum
7 chr2:234062000-234108400 Weak transcription Brain Inferior Temporal Lobe brain
8 chr2:234074200-234111200 Weak transcription Brain Substantia Nigra brain
9 chr2:234074600-234122000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
10 chr2:234074800-234101000 Strong transcription Primary hematopoietic stem cells blood
11 chr2:234075000-234100000 Weak transcription HUVEC blood vessel
12 chr2:234075200-234111800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr2:234075200-234117000 Strong transcription Primary T helper cells PMA-I stimulated --
14 chr2:234075400-234111200 Strong transcription Primary T helper cells fromperipheralblood blood
15 chr2:234075400-234113800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr2:234075400-234115200 Strong transcription Primary T cells fromperipheralblood blood
17 chr2:234077200-234117200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
18 chr2:234077800-234106400 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr2:234078200-234110000 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr2:234085200-234107200 Strong transcription Thymus Thymus
21 chr2:234086800-234099600 Strong transcription Rectal Mucosa Donor 29 rectum
22 chr2:234089000-234099000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr2:234089000-234101200 Strong transcription Dnd41 blood
24 chr2:234089000-234102400 Weak transcription H1 Cell Line embryonic stem cell
25 chr2:234089000-234111200 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr2:234089000-234111400 Weak transcription Fetal Muscle Leg muscle
27 chr2:234089200-234111400 Weak transcription Left Ventricle heart
28 chr2:234089400-234111000 Strong transcription Fetal Thymus thymus
29 chr2:234089800-234100200 Weak transcription H9 Cell Line embryonic stem cell
30 chr2:234089800-234106000 Weak transcription Fetal Intestine Small intestine
31 chr2:234090200-234101000 Strong transcription Placenta Placenta
32 chr2:234090200-234113800 Strong transcription Primary T helper naive cells from peripheral blood blood
33 chr2:234090800-234099600 Strong transcription Sigmoid Colon Sigmoid Colon
34 chr2:234091400-234111200 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr2:234091800-234111200 Weak transcription Stomach Smooth Muscle stomach
36 chr2:234092000-234101000 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr2:234092800-234107400 Strong transcription Lung lung
38 chr2:234093000-234100600 Weak transcription Brain Angular Gyrus brain
39 chr2:234094000-234111400 Weak transcription Brain Cingulate Gyrus brain
40 chr2:234094600-234105200 Weak transcription Fetal Brain Male brain
41 chr2:234094800-234102000 Weak transcription Fetal Heart heart
42 chr2:234095000-234099200 Strong transcription Primary neutrophils fromperipheralblood blood
43 chr2:234095000-234107400 Strong transcription Adipose Nuclei Adipose
44 chr2:234095200-234099400 Strong transcription Primary B cells from cord blood blood
45 chr2:234095200-234110800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr2:234095200-234111200 Weak transcription Brain Hippocampus Middle brain
47 chr2:234095200-234111600 Weak transcription Brain Anterior Caudate brain
48 chr2:234095600-234099200 Strong transcription Right Ventricle heart
49 chr2:234095800-234107400 Strong transcription GM12878-XiMat blood
50 chr2:234095800-234109800 Strong transcription Primary B cells from peripheral blood blood

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