Variant report

Variant	rs3905331
Chromosome Location	chr8:66932804-66932805
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr8:66932526-66932814	K562	blood:	n/a	n/a
2	KAP1	chr8:66932322-66933554	U2OS	brain:	n/a	n/a
3	GATA3	chr8:66932618-66933688	MCF-7	breast:	n/a	n/a
4	CUX1	chr8:66932756-66932939	K562	blood:	n/a	chr8:66932818-66932827
5	CEBPB	chr8:66932540-66932964	HepG2	liver:	n/a	n/a
6	TCF12	chr8:66932717-66933831	MCF-7	breast:	n/a	n/a
7	TCF12	chr8:66932766-66934001	ECC-1	luminal epithelium:	n/a	n/a
8	TCF12	chr8:66932796-66934138	ECC-1	luminal epithelium:	n/a	n/a
9	ZNF263	chr8:66932351-66933868	HEK293-T-REx	kidney:	n/a	chr8:66932772-66932781
10	CEBPB	chr8:66932719-66933471	MCF-7	breast:	n/a	n/a
11	GATA3	chr8:66932732-66933626	MCF-7	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr8:66752746..66756404-chr8:66931747..66936511,11	MCF-7	breast:
2	chr8:66931541..66933360-chr8:66943140..66945695,2	MCF-7	breast:
3	chr8:66750114..66752616-chr8:66932184..66934106,2	MCF-7	breast:

Variant related genes	Relation type
DNAJC5B	TF binding region
ENSG00000205268	Chromatin interaction
ENSG00000272192	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66922800-66933000	Weak transcription	Duodenum Mucosa	Duodenum
2	chr8:66923200-66934400	Weak transcription	Primary T cells fromperipheralblood	blood
3	chr8:66923200-66934600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr8:66928400-66934600	Weak transcription	Primary T helper cells fromperipheralblood	blood
5	chr8:66929000-66935200	Weak transcription	Primary B cells from peripheral blood	blood
6	chr8:66929200-66933600	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr8:66931000-66938800	Weak transcription	Spleen	Spleen
8	chr8:66931400-66933400	Enhancers	Hela-S3	cervix
9	chr8:66931600-66933000	Weak transcription	Lung	lung
10	chr8:66931600-66933400	Weak transcription	Fetal Thymus	thymus
11	chr8:66931600-66933400	Weak transcription	A549	lung
12	chr8:66931600-66933600	Weak transcription	Thymus	Thymus
13	chr8:66931600-66934000	Weak transcription	Primary T cells from cord blood	blood
14	chr8:66931600-66934400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
15	chr8:66931600-66934400	Weak transcription	Primary T helper cells PMA-I stimulated	--
16	chr8:66931600-66935400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
17	chr8:66931600-66938800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
18	chr8:66932600-66933600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr8:66932600-66935000	Enhancers	Stomach Mucosa	stomach
20	chr8:66932800-66933200	Enhancers	Placenta	Placenta
21	chr8:66932800-66933800	Enhancers	Pancreas	Pancrea
22	chr8:66932800-66934800	Enhancers	Esophagus	oesophagus

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