The 2.0 version of rSNPBase

Variant report

Variant rs3943889
Chromosome Location chr2:231031782-231031783
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231023600-231032200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr2:231024800-231036400 Weak transcription Colon Smooth Muscle Colon
3 chr2:231025000-231032000 Weak transcription Primary hematopoietic stem cells blood
4 chr2:231025000-231032000 Weak transcription Left Ventricle heart
5 chr2:231025000-231032000 Weak transcription Ovary ovary
6 chr2:231025000-231032200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr2:231025000-231032200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr2:231025000-231032200 Weak transcription Lung lung
9 chr2:231025000-231033800 Weak transcription Small Intestine intestine
10 chr2:231025000-231034200 Weak transcription Brain Substantia Nigra brain
11 chr2:231025000-231034400 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr2:231025000-231034400 Weak transcription Brain Cingulate Gyrus brain
13 chr2:231025000-231034400 Weak transcription Duodenum Mucosa Duodenum
14 chr2:231025000-231034400 Weak transcription Pancreas Pancrea
15 chr2:231025000-231034600 Weak transcription Brain Anterior Caudate brain
16 chr2:231025000-231034800 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr2:231025000-231035000 Weak transcription Placenta Placenta
18 chr2:231025000-231035400 Weak transcription Brain Hippocampus Middle brain
19 chr2:231025000-231036200 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr2:231025000-231036200 Weak transcription Fetal Intestine Large intestine
21 chr2:231025000-231036600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr2:231025000-231036600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr2:231025000-231036600 Weak transcription Fetal Muscle Trunk muscle
24 chr2:231025000-231036600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr2:231025000-231040000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr2:231025400-231035000 Weak transcription Right Ventricle heart
27 chr2:231025600-231032000 Weak transcription Spleen Spleen
28 chr2:231026000-231032200 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr2:231026200-231036200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr2:231026400-231036200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:231026400-231041600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr2:231026400-231041800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr2:231026600-231032000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr2:231026600-231035000 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr2:231026600-231037000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr2:231026600-231040200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr2:231026600-231041400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr2:231027800-231032000 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr2:231027800-231032200 Weak transcription Aorta Aorta
40 chr2:231028200-231036600 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr2:231028400-231032200 Weak transcription Dnd41 blood
42 chr2:231028400-231034400 Strong transcription Primary neutrophils fromperipheralblood blood
43 chr2:231028400-231034400 Strong transcription Primary T cells from cord blood blood
44 chr2:231028400-231035000 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr2:231028400-231067000 Strong transcription Primary B cells from peripheral blood blood
46 chr2:231028600-231039600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr2:231028600-231051200 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr2:231028800-231034000 Weak transcription Colonic Mucosa Colon
49 chr2:231028800-231035400 Strong transcription Primary T helper cells PMA-I stimulated --
50 chr2:231028800-231051600 Strong transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015