Variant report

Variant rs3948659
Chromosome Location chr7:38375971-38375972
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:38371800-38380600 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr7:38373800-38376000 Flanking Active TSS Dnd41 blood
3 chr7:38374200-38377000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr7:38374200-38377600 Enhancers Placenta Placenta
5 chr7:38374400-38376000 Enhancers Fetal Muscle Leg muscle
6 chr7:38374600-38376400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr7:38374600-38376600 Enhancers Primary T helper cells fromperipheralblood blood
8 chr7:38374800-38376000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
9 chr7:38374800-38376000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr7:38374800-38376400 Enhancers Primary T helper cells PMA-I stimulated --
11 chr7:38374800-38376600 Enhancers Fetal Adrenal Gland Adrenal Gland
12 chr7:38375000-38376600 Enhancers Primary B cells from peripheral blood blood
13 chr7:38375200-38376000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr7:38375200-38376000 Enhancers Thymus Thymus
15 chr7:38375200-38376200 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr7:38375200-38376400 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr7:38375200-38376600 Flanking Active TSS Primary T cells fromperipheralblood blood
18 chr7:38375200-38376800 Enhancers Pancreas Pancrea
19 chr7:38375200-38377000 Enhancers Primary T cells from cord blood blood
20 chr7:38375400-38376000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
21 chr7:38375400-38376000 Enhancers Fetal Stomach stomach
22 chr7:38375400-38376000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
23 chr7:38375400-38376400 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
24 chr7:38375400-38377600 Flanking Active TSS K562 blood
25 chr7:38375400-38380800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr7:38375600-38376600 Enhancers Small Intestine intestine
27 chr7:38375600-38377400 Enhancers Fetal Thymus thymus
28 chr7:38375600-38380000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr7:38375600-38380000 Weak transcription Spleen Spleen
30 chr7:38375800-38376000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr7:38375800-38376000 Enhancers Primary T helper naive cells from peripheral blood blood
32 chr7:38375800-38376000 Active TSS Primary T killer memory cells from peripheral blood blood
33 chr7:38375800-38376000 Enhancers Adipose Nuclei Adipose
34 chr7:38375800-38376000 Active TSS Brain Hippocampus Middle brain
35 chr7:38375800-38376000 Active TSS Duodenum Mucosa Duodenum
36 chr7:38375800-38376000 Enhancers Rectal Mucosa Donor 29 rectum
37 chr7:38375800-38376000 Enhancers GM12878-XiMat blood
38 chr7:38375800-38376200 Active TSS Fetal Intestine Large intestine
39 chr7:38375800-38376200 Active TSS Fetal Intestine Small intestine
40 chr7:38375800-38376400 Enhancers Primary B cells from cord blood blood
41 chr7:38375800-38376600 Enhancers Rectal Mucosa Donor 31 rectum
42 chr7:38375800-38377400 Enhancers Primary hematopoietic stem cells blood
43 chr7:38375800-38377400 Enhancers Primary T killer naive cells fromperipheralblood blood
44 chr7:38375800-38378200 Enhancers Primary monocytes fromperipheralblood blood
45 chr7:38375800-38379800 Weak transcription Primary T regulatory cells fromperipheralblood blood
46 chr7:38375800-38380000 Weak transcription Fetal Muscle Trunk muscle
47 chr7:38375800-38380400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr7:38375800-38380400 Weak transcription A549 lung
49 chr7:38375800-38380800 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr7:38375800-38380800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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