Variant report

Variant	rs3956754
Chromosome Location	chr7:38393989-38393990
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr7:38393980-38394130	GM12872	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
2	CTCF	chr7:38393980-38394130	GM12868	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
3	TCF3	chr7:38393823-38394101	GM12878	blood:	n/a	n/a
4	CTCF	chr7:38393920-38394070	HMEC	breast:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
5	CTCF	chr7:38393980-38394130	AoAF	blood vessel:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
6	SMC3	chr7:38393944-38394161	Hela-S3	cervix:	n/a	chr7:38394050-38394064
7	CTCF	chr7:38393980-38394130	AG09319	gingival:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
8	CTCF	chr7:38393940-38394184	H1-hESC	embryonic stem cell:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
9	CTCF	chr7:38393943-38394208	MCF-7	breast:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
10	CTCF	chr7:38393880-38394150	RPTEC	kidney:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
11	CTCF	chr7:38393920-38394070	GM12873	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
12	CTCF	chr7:38393788-38394244	K562	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
13	CTCF	chr7:38393919-38394193	GM12891	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
14	SPI1	chr7:38393659-38394079	GM12891	blood:	n/a	chr7:38393787-38393794
15	CTCF	chr7:38393980-38394130	K562	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
16	ZNF263	chr7:38393453-38394313	HEK293-T-REx	kidney:	n/a	chr7:38393970-38393979
17	CTCF	chr7:38393960-38394110	HEEpiC	esophagus:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
18	POLR2A	chr7:38393612-38394160	GM12878	blood:	n/a	n/a
19	CTCF	chr7:38393926-38394195	MCF-7	breast:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
20	CTCF	chr7:38393848-38394271	A549	lung:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
21	CTCF	chr7:38393880-38394030	HCT-116	colon:	n/a	n/a
22	EBF1	chr7:38393799-38394003	GM12878	blood:	n/a	n/a
23	CTCF	chr7:38393914-38394198	GM19240	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
24	CTCF	chr7:38393980-38394130	GM12878	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
25	CTCF	chr7:38393932-38394184	GM12878	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
26	CTCF	chr7:38393980-38394130	GM12867	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
27	CTCFL	chr7:38393941-38394095	K562	blood:	n/a	n/a
28	CTCF	chr7:38393880-38394030	GM12872	blood:	n/a	n/a
29	CTCF	chr7:38393880-38394030	HVMF	connective:	n/a	n/a
30	POLR2A	chr7:38392959-38394104	GM12892	blood:	n/a	n/a
31	ZNF143	chr7:38393938-38394140	H1-hESC	embryonic stem cell:	n/a	n/a
32	CTCF	chr7:38393980-38394130	GM12864	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
33	CTCF	chr7:38393980-38394130	HL-60	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
34	CTCF	chr7:38393951-38394179	GM10266	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
35	RAD21	chr7:38393916-38394140	K562	blood:	n/a	chr7:38394050-38394064 chr7:38394048-38394060 chr7:38394052-38394061 chr7:38394046-38394065
36	CTCF	chr7:38393907-38394126	HepG2	liver:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
37	RCOR1	chr7:38393983-38394165	K562	blood:	n/a	n/a
38	RAD21	chr7:38393935-38394128	K562	blood:	n/a	chr7:38394050-38394064 chr7:38394048-38394060 chr7:38394052-38394061 chr7:38394046-38394065
39	CTCF	chr7:38393926-38394195	GM10248	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
40	CTCF	chr7:38393937-38394194	ProgFib	skin:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
41	CTCF	chr7:38393980-38394130	WERI-Rb-1	eye:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
42	CTCF	chr7:38393887-38394183	HepG2	liver:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
43	CTCF	chr7:38393880-38394030	GM06990	blood:	n/a	n/a
44	CTCF	chr7:38393940-38394090	GM12871	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
45	CTCF	chr7:38393936-38394233	MCF-7	breast:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
46	CTCF	chr7:38393916-38394199	IMR90	lung:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
47	CTCF	chr7:38393980-38394130	HEK293	kidney:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066
48	ZNF143	chr7:38393915-38394181	K562	blood:	n/a	n/a
49	ZNF263	chr7:38393834-38394216	K562	blood:	n/a	chr7:38393970-38393979
50	CTCF	chr7:38393960-38394110	GM12867	blood:	n/a	chr7:38394049-38394065 chr7:38394050-38394063 chr7:38394050-38394063 chr7:38394043-38394064 chr7:38394048-38394066

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:38378347..38380949-chr7:38392502..38394879,2	K562	blood:
2	chr7:38375070..38375771-chr7:38393808..38394547,2	MCF-7	breast:

Variant related genes	Relation type
TRGV5	TF binding region
ENSG00000249978	Chromatin interaction
ENSG00000226212	Chromatin interaction

Extended variants
information (count: 104 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11981038	0.84[ASN][1000 genomes]
rs1808312	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs2192680	0.94[ASN][1000 genomes]
rs2215952	0.94[ASN][1000 genomes]
rs34822522	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs3999877	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs3999879	0.90[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs3999880	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs3999882	0.89[AMR][1000 genomes]
rs4078668	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs4478467	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs57448903	0.90[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs58353432	0.92[ASN][1000 genomes]
rs59611922	0.88[ASN][1000 genomes]
rs60704973	0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73357290	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73357292	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73357293	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73357300	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73357302	0.93[AMR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:84 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758112	chr7:38218703-38523455	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
2	esv2759524	chr7:38218703-38523455	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
3	nsv427776	chr7:38218703-38523455	Genic enhancers Transcr. at gene 5' and 3' Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
4	nsv1025974	chr7:38227528-38503472	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
5	nsv538819	chr7:38227528-38503472	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
6	nsv932229	chr7:38248340-38727527	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
7	nsv1027803	chr7:38257707-38410660	Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
8	nsv538820	chr7:38257707-38410660	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
9	nsv1020990	chr7:38257707-38503472	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
10	nsv433054	chr7:38268395-38403367	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
11	nsv433049	chr7:38268395-38404971	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
12	esv2755783	chr7:38271544-38404971	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
13	esv33146	chr7:38288048-38406196	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
14	nsv820039	chr7:38289515-38411222	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
15	nsv824074	chr7:38293736-38404608	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
16	esv2757222	chr7:38294079-38418165	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
17	nsv1016455	chr7:38294089-38402496	Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
18	nsv429718	chr7:38311098-38404971	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
19	nsv519863	chr7:38318590-38417556	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
20	nsv1016931	chr7:38319339-38398047	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
21	nsv1019941	chr7:38319437-38472680	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
22	nsv1031936	chr7:38319437-38503472	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
23	nsv429745	chr7:38323485-38470561	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
24	nsv830965	chr7:38350614-38521047	Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
25	nsv1033238	chr7:38356595-38400945	Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
26	nsv1028718	chr7:38356733-38396464	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
27	nsv1029851	chr7:38357075-38398047	Flanking Active TSS Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
28	nsv1016651	chr7:38357133-38405085	Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
29	nsv824077	chr7:38357188-38395465	Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
30	nsv1033526	chr7:38358227-38405085	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
31	esv1803652	chr7:38372659-38407572	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
32	nsv966780	chr7:38374343-38407875	Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
33	esv1797294	chr7:38377067-38406167	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
34	nsv1016350	chr7:38378718-38418165	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
35	esv1850821	chr7:38378932-38411586	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
36	esv1847734	chr7:38379798-38408244	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
37	nsv8078	chr7:38379856-38406195	Enhancers Active TSS Flanking Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
38	nsv5707	chr7:38380984-38407182	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
39	nsv824078	chr7:38382278-38395465	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
40	esv1844806	chr7:38382308-38406367	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
41	esv1801754	chr7:38383309-38411786	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
42	esv1796040	chr7:38383509-38407248	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
43	esv1801707	chr7:38383509-38411586	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
44	nsv1020630	chr7:38384841-38415389	Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
45	nsv1021462	chr7:38384841-38418165	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
46	nsv1032769	chr7:38384841-38418465	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
47	esv9133	chr7:38385012-38398722	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
48	esv3478170	chr7:38385100-38398748	Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
49	esv3478171	chr7:38385100-38398748	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
50	nsv824079	chr7:38385529-38395465	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:38381400-38408000	Weak transcription	Right Atrium	heart
2	chr7:38388800-38394200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr7:38389600-38413800	Weak transcription	K562	blood
4	chr7:38390600-38394600	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr7:38391200-38394200	Enhancers	Primary T helper cells fromperipheralblood	blood
6	chr7:38391400-38396600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
7	chr7:38392000-38394200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr7:38392000-38394600	Enhancers	Primary hematopoietic stem cells short term culture	blood
9	chr7:38392400-38398200	Weak transcription	Primary hematopoietic stem cells	blood
10	chr7:38392800-38394000	Enhancers	Primary B cells from cord blood	blood
11	chr7:38392800-38394000	Flanking Active TSS	Primary T cells fromperipheralblood	blood
12	chr7:38392800-38394200	Enhancers	Primary B cells from peripheral blood	blood
13	chr7:38392800-38394400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
14	chr7:38392800-38394400	Flanking Active TSS	Dnd41	blood
15	chr7:38393200-38394400	Enhancers	GM12878-XiMat	blood
16	chr7:38393200-38394600	Enhancers	Fetal Thymus	thymus
17	chr7:38393600-38394000	Enhancers	Thymus	Thymus
18	chr7:38393600-38394400	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
19	chr7:38393600-38395400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
20	chr7:38393600-38395400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
21	chr7:38393600-38395800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
22	chr7:38393800-38394000	Flanking Active TSS	Primary T cells from cord blood	blood
23	chr7:38393800-38394000	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
24	chr7:38393800-38394200	Weak transcription	Spleen	Spleen
25	chr7:38393800-38394400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
26	chr7:38393800-38396000	Enhancers	Primary T helper cells PMA-I stimulated	--
27	chr7:38393800-38396200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
28	chr7:38393800-38398000	Weak transcription	Primary T helper naive cells from peripheral blood	blood

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