Variant report

Variant rs3969710
Chromosome Location chr1:145294694-145294695
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145277600-145305400 Weak transcription HepG2 liver
2 chr1:145277800-145296400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:145277800-145323400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:145281600-145296400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:145281800-145297800 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr1:145281800-145298600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:145282000-145325400 Weak transcription Fetal Brain Female brain
8 chr1:145283000-145318600 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr1:145283400-145298600 Weak transcription A549 lung
10 chr1:145283800-145311200 Weak transcription Stomach Mucosa stomach
11 chr1:145286800-145304000 Weak transcription K562 blood
12 chr1:145289600-145295000 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr1:145289600-145300200 Weak transcription Fetal Brain Male brain
14 chr1:145289800-145294800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:145289800-145294800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
16 chr1:145290000-145298800 Strong transcription Primary monocytes fromperipheralblood blood
17 chr1:145290200-145295000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:145290400-145294800 Strong transcription NHEK skin
19 chr1:145290600-145296400 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr1:145290800-145294800 Strong transcription Cortex derived primary cultured neurospheres brain
21 chr1:145290800-145294800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:145290800-145296200 Weak transcription Brain Hippocampus Middle brain
23 chr1:145290800-145298200 Strong transcription Osteobl bone
24 chr1:145290800-145303800 Weak transcription H9 Cell Line embryonic stem cell
25 chr1:145290800-145313800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr1:145290800-145323400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:145290800-145328000 Weak transcription Small Intestine intestine
28 chr1:145291000-145294800 Strong transcription Primary B cells from peripheral blood blood
29 chr1:145291000-145295000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr1:145291000-145296200 Weak transcription Right Ventricle heart
31 chr1:145291000-145296600 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr1:145291000-145296600 Weak transcription Hela-S3 cervix
33 chr1:145291000-145323400 Weak transcription Brain Anterior Caudate brain
34 chr1:145291000-145323600 Weak transcription Brain Angular Gyrus brain
35 chr1:145291000-145324000 Weak transcription Brain Substantia Nigra brain
36 chr1:145292200-145295800 Weak transcription Spleen Spleen
37 chr1:145292200-145296200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:145292200-145296200 Weak transcription Pancreas Pancrea
39 chr1:145292200-145296400 Weak transcription Gastric stomach
40 chr1:145292200-145296600 Weak transcription Placenta Amnion Placenta Amnion
41 chr1:145292200-145296600 Weak transcription Psoas Muscle Psoas
42 chr1:145292400-145296200 Weak transcription Thymus Thymus
43 chr1:145292600-145296200 Weak transcription Colonic Mucosa Colon
44 chr1:145292600-145296200 Weak transcription Colon Smooth Muscle Colon
45 chr1:145292600-145296200 Weak transcription Fetal Lung lung
46 chr1:145292600-145296600 Weak transcription Rectal Smooth Muscle rectum
47 chr1:145292600-145296600 Weak transcription NHLF lung
48 chr1:145292600-145298200 Weak transcription NH-A brain
49 chr1:145292800-145296200 Weak transcription HMEC breast
50 chr1:145292800-145304400 Weak transcription Pancreatic Islets Pancreatic Islet

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