| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1031666 |
chr5:177988601-178236068 |
Bivalent/Poised TSS Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
18 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv883217 |
chr5:178099758-178193081 |
Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1031206 |
chr5:178149292-178283614 |
Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv537973 |
chr5:178149292-178283614 |
Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv3372610 |
chr5:178171746-178175944 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
esv3354577 |
chr5:178173046-178177244 |
Weak transcription Enhancers
|
lncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 7 |
esv1030643 |
chr5:178173731-178173732 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 8 |
esv2287907 |
chr5:178173732-178173735 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
