| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv530421 |
chr12:32825335-33465991 |
Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
38 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv558218 |
chr12:33302438-33334261 |
Weak transcription ZNF genes & repeats Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1037459 |
chr12:33310703-33905662 |
Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
20 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv541459 |
chr12:33310703-33905662 |
Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
20 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1054927 |
chr12:33325003-33379954 |
Enhancers ZNF genes & repeats Weak transcription Active TSS
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv519988 |
chr12:33332749-33337457 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
esv1188399 |
chr12:33333333-33333334 |
ZNF genes & repeats Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
