The 2.0 version of rSNPBase

Variant report

Variant rs397770871
Chromosome Location chr2:10286782-10286783
allele -/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:10269600-10299400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr2:10271400-10303800 Weak transcription Primary hematopoietic stem cells blood
3 chr2:10272600-10289800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr2:10273800-10289800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:10273800-10330400 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr2:10274000-10299200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:10276400-10307400 Weak transcription Placenta Amnion Placenta Amnion
8 chr2:10276600-10301800 Weak transcription Osteobl bone
9 chr2:10277600-10321600 Weak transcription K562 blood
10 chr2:10277800-10295400 Weak transcription Hela-S3 cervix
11 chr2:10278000-10302200 Weak transcription HSMM muscle
12 chr2:10278000-10311800 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr2:10279400-10292000 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr2:10279600-10295600 Weak transcription Fetal Brain Female brain
15 chr2:10280800-10287000 Strong transcription Primary neutrophils fromperipheralblood blood
16 chr2:10281000-10292400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr2:10281000-10294200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr2:10281600-10287000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr2:10281800-10287000 Strong transcription Primary monocytes fromperipheralblood blood
20 chr2:10282000-10286800 Strong transcription Cortex derived primary cultured neurospheres brain
21 chr2:10282000-10287800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr2:10282200-10290200 Strong transcription Primary hematopoietic stem cells short term culture blood
23 chr2:10282200-10316600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr2:10282400-10287000 Strong transcription Thymus Thymus
25 chr2:10282400-10289800 Strong transcription Dnd41 blood
26 chr2:10283000-10289200 Strong transcription Fetal Thymus thymus
27 chr2:10283000-10289600 Weak transcription Primary T cells from cord blood blood
28 chr2:10283400-10287000 Strong transcription H1 Cell Line embryonic stem cell
29 chr2:10283400-10287800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr2:10283600-10289800 Weak transcription Primary T cells fromperipheralblood blood
31 chr2:10283800-10289800 Weak transcription Duodenum Mucosa Duodenum
32 chr2:10284000-10286800 Strong transcription GM12878-XiMat blood
33 chr2:10284400-10288800 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr2:10284400-10289800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr2:10284400-10299400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr2:10284600-10295400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr2:10285000-10287000 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr2:10285000-10299400 Weak transcription Fetal Lung lung
39 chr2:10285200-10286800 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr2:10285200-10286800 Genic enhancers Fetal Muscle Trunk muscle
41 chr2:10285200-10289800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr2:10285200-10299800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr2:10285400-10302000 Weak transcription HMEC breast
44 chr2:10285600-10286800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr2:10285600-10287000 Strong transcription NHEK skin
46 chr2:10285600-10287800 Strong transcription A549 lung
47 chr2:10285600-10307400 Weak transcription H9 Cell Line embryonic stem cell
48 chr2:10285800-10287800 Strong transcription Fetal Intestine Small intestine
49 chr2:10285800-10310400 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr2:10286200-10287000 Strong transcription Fetal Stomach stomach

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Last update: Aug 31, 2015