No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
nsv999435 |
chr1:188997868-189849121 |
Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
inside rSNPs
|
diseases
|
2 |
nsv1012877 |
chr1:189035500-189804333 |
Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
11 gene(s)
|
inside rSNPs
|
diseases
|
3 |
nsv534452 |
chr1:189129332-189924389 |
Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
4 |
nsv1005794 |
chr1:189488465-190063923 |
Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
5 |
nsv1009290 |
chr1:189554045-189908459 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
7 gene(s)
|
inside rSNPs
|
diseases
|
6 |
nsv497885 |
chr1:189562225-190086077 |
Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
7 |
nsv868954 |
chr1:189605447-190135265 |
Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
8 |
nsv3921 |
chr1:189668405-189810638 |
Enhancers Weak transcription Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
9 |
nsv1011758 |
chr1:189683945-189804333 |
Enhancers Flanking Active TSS Weak transcription Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
10 |
nsv872735 |
chr1:189688204-189785833 |
Enhancers Weak transcription Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
11 |
nsv1013668 |
chr1:189721806-189830237 |
Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
12 |
esv3522877 |
chr1:189728929-189784677 |
Enhancers Weak transcription Flanking Active TSS Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
13 |
esv3522878 |
chr1:189729329-189784327 |
Enhancers Weak transcription Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
14 |
esv3522879 |
chr1:189729329-189784327 |
Enhancers Weak transcription Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
15 |
esv2756874 |
chr1:189736833-189819487 |
Enhancers Flanking Active TSS Weak transcription Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
16 |
esv2758983 |
chr1:189736833-189819487 |
Flanking Active TSS Enhancers Weak transcription Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
17 |
nsv548532 |
chr1:189758772-190371671 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
18 |
nsv872737 |
chr1:189765121-189785833 |
Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
19 |
nsv872738 |
chr1:189765121-189790017 |
Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
20 |
nsv872739 |
chr1:189765121-189805799 |
Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
21 |
nsv872740 |
chr1:189765121-189883637 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
22 |
nsv872742 |
chr1:189768826-189785833 |
Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
23 |
nsv872743 |
chr1:189769181-189785833 |
Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
24 |
nsv548539 |
chr1:189769181-189786558 |
Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
25 |
nsv872744 |
chr1:189769181-189790017 |
Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
26 |
nsv872745 |
chr1:189769181-189805799 |
Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
27 |
nsv1015065 |
chr1:189769617-189810172 |
Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
28 |
esv1805311 |
chr1:189772214-189786204 |
Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
29 |
nsv997993 |
chr1:189774125-189939680 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
30 |
esv1814987 |
chr1:189776217-189788400 |
Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
31 |
nsv8602 |
chr1:189776795-189786687 |
Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
32 |
esv1814038 |
chr1:189776842-189785721 |
Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
33 |
nsv520978 |
chr1:189777241-189785833 |
Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
34 |
nsv872746 |
chr1:189777241-189805799 |
Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
35 |
esv21130 |
chr1:189777391-189786094 |
Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
36 |
esv1808054 |
chr1:189779199-189785921 |
Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
37 |
esv1813048 |
chr1:189779199-189785921 |
Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
38 |
esv1810671 |
chr1:189779399-189785721 |
Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
39 |
esv1814018 |
chr1:189779399-189786204 |
Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
40 |
nsv470757 |
chr1:189779629-189808043 |
Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
41 |
esv1811209 |
chr1:189780142-189785833 |
Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
42 |
esv1811942 |
chr1:189780142-189785833 |
Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
43 |
esv1760621 |
chr1:189784039-189784041 |
Inactive region
|
lncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
44 |
esv2488377 |
chr1:189784040-189784041 |
Inactive region
|
lncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|