Variant report

Variant rs397849939
Chromosome Location chr12:773554-773555
allele -/AA
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:753400-776000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr12:756800-776000 Weak transcription A549 lung
3 chr12:760600-776600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr12:770200-773600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
5 chr12:771400-773600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
6 chr12:771400-773600 Enhancers Fetal Adrenal Gland Adrenal Gland
7 chr12:771400-776200 Weak transcription Lung lung
8 chr12:772200-774200 Enhancers Primary hematopoietic stem cells short term culture blood
9 chr12:772400-773600 Enhancers iPS-15b Cell Line embryonic stem cell
10 chr12:772600-775400 Weak transcription Primary B cells from peripheral blood blood
11 chr12:772600-775800 Enhancers GM12878-XiMat blood
12 chr12:772600-776200 Weak transcription HSMM muscle
13 chr12:772800-773600 Enhancers Primary T helper cells fromperipheralblood blood
14 chr12:772800-773600 Enhancers Skeletal Muscle Male skeletal muscle
15 chr12:772800-773600 Bivalent Enhancer HepG2 liver
16 chr12:772800-773600 Enhancers K562 blood
17 chr12:772800-774000 Enhancers Primary T cells from cord blood blood
18 chr12:772800-774000 Weak transcription Ovary ovary
19 chr12:772800-774000 Enhancers Thymus Thymus
20 chr12:772800-775600 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr12:772800-775800 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr12:772800-775800 Weak transcription Rectal Smooth Muscle rectum
23 chr12:772800-776200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr12:772800-776200 Weak transcription HSMMtube muscle
25 chr12:772800-776400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr12:772800-776400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr12:772800-777000 Enhancers Primary neutrophils fromperipheralblood blood
28 chr12:772800-786600 Enhancers Fetal Thymus thymus
29 chr12:773000-773600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr12:773000-773600 Enhancers Primary T helper 17 cells PMA-I stimulated --
31 chr12:773000-773600 Enhancers Adipose Nuclei Adipose
32 chr12:773000-774200 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr12:773000-774200 Enhancers Primary T helper cells PMA-I stimulated --
34 chr12:773000-774600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr12:773000-774600 Weak transcription Fetal Heart heart
36 chr12:773000-775600 Weak transcription Primary T cells fromperipheralblood blood
37 chr12:773000-775800 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr12:773000-776000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr12:773000-776000 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr12:773000-776000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr12:773000-776000 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr12:773000-776000 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr12:773000-776200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr12:773000-776200 Weak transcription Right Atrium heart
45 chr12:773000-776200 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr12:773000-776200 Weak transcription NHDF-Ad bronchial
47 chr12:773000-776400 Weak transcription Primary B cells from cord blood blood
48 chr12:773000-776400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr12:773000-776600 Weak transcription Primary hematopoietic stem cells blood
50 chr12:773000-781800 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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