Variant report

Variant	rs397987041
Chromosome Location	chr2:191284933-191284934
allele	lengthTooLong
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:191283738..191285427-chr2:191577690..191580549,2	MCF-7	breast:
2	chr2:191281256..191282888-chr2:191283439..191285741,2	K562	blood:
3	chr2:191283057..191285347-chr2:191287084..191288726,2	K562	blood:
4	chr2:191271590..191276457-chr2:191281985..191285840,5	MCF-7	breast:
5	chr2:191283847..191285576-chr2:191285835..191288726,2	K562	blood:

Variant related genes	Relation type
ENSG00000151690	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2318138	chr2:191284710-191285128	Enhancers Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv1165532	chr2:191284899-191284933	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:65 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:191273800-191301400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr2:191274200-191291600	Weak transcription	Fetal Stomach	stomach
3	chr2:191274400-191285000	Weak transcription	Colon Smooth Muscle	Colon
4	chr2:191274600-191291400	Weak transcription	Fetal Intestine Large	intestine
5	chr2:191274800-191285000	Weak transcription	Rectal Smooth Muscle	rectum
6	chr2:191274800-191286000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr2:191274800-191300800	Weak transcription	Stomach Smooth Muscle	stomach
8	chr2:191277400-191291400	Weak transcription	Fetal Intestine Small	intestine
9	chr2:191278400-191291200	Weak transcription	Fetal Brain Female	brain
10	chr2:191278400-191291600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr2:191278600-191301200	Weak transcription	Pancreas	Pancrea
12	chr2:191278800-191285200	Enhancers	Breast Myoepithelial Primary Cells	Breast
13	chr2:191278800-191290000	Weak transcription	K562	blood
14	chr2:191278800-191300800	Weak transcription	Fetal Thymus	thymus
15	chr2:191278800-191301200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
16	chr2:191279000-191296800	Weak transcription	Duodenum Mucosa	Duodenum
17	chr2:191279000-191300800	Weak transcription	Esophagus	oesophagus
18	chr2:191279200-191303000	Weak transcription	NHEK	skin
19	chr2:191279400-191296400	Weak transcription	Rectal Mucosa Donor 31	rectum
20	chr2:191279800-191285400	Enhancers	Primary T killer memory cells from peripheral blood	blood
21	chr2:191279800-191285600	Weak transcription	Pancreatic Islets	Pancreatic Islet
22	chr2:191280400-191291400	Weak transcription	Thymus	Thymus
23	chr2:191280400-191296400	Weak transcription	Spleen	Spleen
24	chr2:191280800-191296400	Weak transcription	Rectal Mucosa Donor 29	rectum
25	chr2:191281400-191291600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
26	chr2:191281400-191292800	Weak transcription	Dnd41	blood
27	chr2:191281400-191296800	Weak transcription	Sigmoid Colon	Sigmoid Colon
28	chr2:191281400-191298600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
29	chr2:191281600-191290000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
30	chr2:191281800-191296800	Weak transcription	Small Intestine	intestine
31	chr2:191282200-191289400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr2:191282200-191296800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
33	chr2:191282400-191285000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
34	chr2:191282400-191297000	Weak transcription	Ovary	ovary
35	chr2:191282600-191285200	Weak transcription	GM12878-XiMat	blood
36	chr2:191282600-191297000	Weak transcription	Fetal Muscle Leg	muscle
37	chr2:191282800-191285200	Enhancers	Primary monocytes fromperipheralblood	blood
38	chr2:191282800-191301200	Weak transcription	Fetal Brain Male	brain
39	chr2:191283000-191289800	Weak transcription	Brain Anterior Caudate	brain
40	chr2:191283000-191292800	Weak transcription	Brain Inferior Temporal Lobe	brain
41	chr2:191283200-191285200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
42	chr2:191283200-191289600	Weak transcription	Primary T cells from cord blood	blood
43	chr2:191283200-191301000	Weak transcription	Fetal Muscle Trunk	muscle
44	chr2:191283600-191286400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
45	chr2:191283800-191286800	Weak transcription	Brain Hippocampus Middle	brain
46	chr2:191283800-191289600	Weak transcription	Brain Cingulate Gyrus	brain
47	chr2:191284000-191290000	Weak transcription	Primary B cells from cord blood	blood
48	chr2:191284000-191296400	Weak transcription	Primary B cells from peripheral blood	blood
49	chr2:191284200-191286200	Weak transcription	Primary T helper cells fromperipheralblood	blood
50	chr2:191284200-191286600	Strong transcription	Primary T cells fromperipheralblood	blood

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