Variant report

Variant	rs398008465
Chromosome Location	chr8:79110650-79110651
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831364	chr8:79034769-79223319	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv982138	chr8:79106680-79116734	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv891055	chr8:79110386-79256864	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv1515665	chr8:79110649-79110650	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:79108200-79113000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr8:79109400-79110800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr8:79109400-79111000	Enhancers	HSMM	muscle
4	chr8:79109400-79111400	Enhancers	Osteobl	bone
5	chr8:79109400-79112800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr8:79109400-79113000	Enhancers	Muscle Satellite Cultured Cells	--
7	chr8:79109400-79113200	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr8:79109400-79113200	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr8:79110000-79111200	Weak transcription	Hela-S3	cervix
10	chr8:79110000-79112000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr8:79110000-79112000	Weak transcription	HMEC	breast
12	chr8:79110400-79112200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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