Variant report

Variant	rs398049306
Chromosome Location	chr1:59173654-59173655
allele	-/GT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:59160810..59163384-chr1:59173119..59175841,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3360957	chr1:59172638-59175090	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv1331500	chr1:59173653-59173655	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:59166000-59176200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr1:59166200-59176200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr1:59166400-59186200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr1:59168600-59174200	Weak transcription	Fetal Brain Female	brain
5	chr1:59170800-59173800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr1:59170800-59176400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr1:59171000-59175200	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr1:59171000-59175200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chr1:59171000-59175400	Weak transcription	HUES64 Cell Line	embryonic stem cell
10	chr1:59171000-59175600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr1:59171200-59175000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr1:59171200-59175400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr1:59171200-59175800	Weak transcription	H1 Cell Line	embryonic stem cell
14	chr1:59171200-59177800	Weak transcription	H9 Cell Line	embryonic stem cell
15	chr1:59173400-59174000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
16	chr1:59173600-59174000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr1:59173600-59174000	Enhancers	HUES48 Cell Line	embryonic stem cell
18	chr1:59173600-59174200	Enhancers	Pancreatic Islets	Pancreatic Islet
19	chr1:59173600-59174400	Enhancers	HepG2	liver
20	chr1:59173600-59177200	Enhancers	Fetal Brain Male	brain

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