Variant report

Variant rs399974
Chromosome Location chr11:67652013-67652014
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:67649800-67653200 Enhancers K562 blood
2 chr11:67651000-67653000 Enhancers ES-I3 Cell Line embryonic stem cell
3 chr11:67651200-67652400 Weak transcription H1 Cell Line embryonic stem cell
4 chr11:67651400-67653000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
5 chr11:67651400-67653000 Enhancers GM12878-XiMat blood
6 chr11:67651400-67653600 Active TSS Primary T regulatory cells fromperipheralblood blood
7 chr11:67651400-67655600 Active TSS Duodenum Mucosa Duodenum
8 chr11:67651400-67657800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr11:67651600-67652200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr11:67651600-67652200 Enhancers Fetal Lung lung
11 chr11:67651600-67652400 Enhancers iPS-18 Cell Line embryonic stem cell
12 chr11:67651600-67652600 Active TSS Primary T helper cells fromperipheralblood blood
13 chr11:67651600-67652600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr11:67651600-67652600 Active TSS NHEK skin
15 chr11:67651600-67652800 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr11:67651600-67652800 Active TSS Breast Myoepithelial Primary Cells Breast
17 chr11:67651600-67652800 Active TSS Primary T helper memory cells from peripheral blood 2 blood
18 chr11:67651600-67652800 Active TSS Primary T helper naive cells from peripheral blood blood
19 chr11:67651600-67652800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr11:67651600-67653000 Active TSS Primary T helper memory cells from peripheral blood 1 blood
21 chr11:67651600-67653000 Active TSS Primary T helper cells PMA-I stimulated --
22 chr11:67651600-67653000 Active TSS Primary T helper 17 cells PMA-I stimulated --
23 chr11:67651600-67653200 Active TSS Primary T cells fromperipheralblood blood
24 chr11:67651600-67654200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr11:67651800-67652200 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr11:67651800-67652400 Enhancers HUES48 Cell Line embryonic stem cell
27 chr11:67651800-67652400 Active TSS Fetal Heart heart
28 chr11:67651800-67652400 Flanking Active TSS Fetal Intestine Small intestine
29 chr11:67651800-67652800 Active TSS Primary T helper naive cells fromperipheralblood blood
30 chr11:67651800-67653000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr11:67651800-67654200 Active TSS Rectal Mucosa Donor 29 rectum
32 chr11:67652000-67652600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr11:67652000-67652600 Enhancers Liver Liver
34 chr11:67652000-67652600 Active TSS Left Ventricle heart
35 chr11:67652000-67652600 Active TSS Stomach Mucosa stomach
36 chr11:67652000-67652800 Active TSS Fetal Intestine Large intestine
37 chr11:67652000-67652800 Active TSS Rectal Mucosa Donor 31 rectum
38 chr11:67652000-67652800 Active TSS Rectal Smooth Muscle rectum
39 chr11:67652000-67653000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr11:67652000-67653200 Active TSS Colonic Mucosa Colon
41 chr11:67652000-67654000 Enhancers HepG2 liver

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