Variant report

Variant rs402308
Chromosome Location chr22:21397340-21397341
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:21386800-21399400 Weak transcription Gastric stomach
2 chr22:21387200-21397400 Weak transcription Duodenum Mucosa Duodenum
3 chr22:21387200-21398200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr22:21387200-21398600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr22:21392000-21399400 Weak transcription Lung lung
6 chr22:21392800-21397400 Weak transcription HMEC breast
7 chr22:21392800-21398000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr22:21393000-21397600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr22:21393000-21397800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr22:21393000-21397800 Weak transcription NHEK skin
11 chr22:21393000-21399600 Weak transcription Fetal Kidney kidney
12 chr22:21393200-21397600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr22:21393200-21397800 Weak transcription HSMMtube muscle
14 chr22:21393200-21398000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr22:21393200-21398000 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr22:21393200-21398600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr22:21393200-21399400 Weak transcription A549 lung
18 chr22:21393400-21397600 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr22:21393400-21397600 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr22:21393600-21398000 Weak transcription Psoas Muscle Psoas
21 chr22:21394400-21397600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr22:21395000-21398000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr22:21395600-21399400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr22:21395600-21399400 Enhancers NHDF-Ad bronchial
25 chr22:21396000-21398800 Enhancers Osteobl bone
26 chr22:21396000-21399200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr22:21396000-21399200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr22:21396200-21399800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr22:21396400-21397600 Weak transcription Placenta Placenta
30 chr22:21396400-21397600 Enhancers Hela-S3 cervix
31 chr22:21396400-21398600 Enhancers HSMM muscle
32 chr22:21396400-21398800 Enhancers Muscle Satellite Cultured Cells --
33 chr22:21396400-21399400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr22:21396400-21399400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr22:21396400-21399400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr22:21396400-21399400 Enhancers Fetal Intestine Small intestine
37 chr22:21396400-21399800 Enhancers Fetal Intestine Large intestine
38 chr22:21396600-21398600 Enhancers Fetal Muscle Trunk muscle
39 chr22:21396800-21397800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr22:21397000-21397400 Weak transcription NH-A brain
41 chr22:21397200-21397400 Enhancers K562 blood
42 chr22:21397200-21398000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr22:21397200-21398600 Enhancers Fetal Muscle Leg muscle
44 chr22:21397200-21398600 Strong transcription Right Atrium heart
45 chr22:21397200-21399400 Enhancers NHLF lung
46 chr22:21397200-21400000 Flanking Active TSS Skeletal Muscle Female skeletal muscle

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