Variant report
Variant | rs404892 |
---|---|
Chromosome Location | chr2:76303913-76303914 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10195421 | 0.82[CHB][hapmap] |
rs12612816 | 0.84[ASN][1000 genomes] |
rs12615814 | 0.83[ASN][1000 genomes] |
rs1524215 | 0.94[CHB][hapmap];0.81[CHD][hapmap];0.84[JPT][hapmap] |
rs365027 | 0.89[AFR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs371016 | 0.84[ASN][1000 genomes] |
rs375530 | 0.84[ASN][1000 genomes] |
rs379749 | 0.83[ASN][1000 genomes] |
rs380810 | 0.84[ASN][1000 genomes] |
rs384304 | 0.84[ASN][1000 genomes] |
rs389616 | 0.84[ASN][1000 genomes] |
rs390189 | 0.84[ASN][1000 genomes] |
rs390652 | 0.84[ASN][1000 genomes] |
rs390687 | 0.84[ASN][1000 genomes] |
rs394278 | 0.84[ASN][1000 genomes] |
rs397424 | 0.84[ASN][1000 genomes] |
rs403631 | 0.84[ASN][1000 genomes] |
rs410367 | 0.84[ASN][1000 genomes] |
rs410954 | 0.84[ASN][1000 genomes] |
rs416093 | 0.84[ASN][1000 genomes] |
rs416264 | 0.84[ASN][1000 genomes] |
rs421884 | 0.85[ASN][1000 genomes] |
rs422600 | 0.84[ASN][1000 genomes] |
rs432117 | 0.84[ASN][1000 genomes] |
rs454793 | 0.84[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv834265 | chr2:76275611-76450728 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:76302600-76307400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |