Variant report

Variant rs40506
Chromosome Location chr5:60525210-60525211
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60523600-60525600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr5:60523600-60525600 Enhancers Muscle Satellite Cultured Cells --
3 chr5:60523600-60525600 Enhancers Gastric stomach
4 chr5:60523600-60526200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
5 chr5:60523600-60526800 Enhancers Pancreas Pancrea
6 chr5:60523800-60525600 Enhancers Lung lung
7 chr5:60524000-60525400 Enhancers HSMM muscle
8 chr5:60524000-60525400 Enhancers NHEK skin
9 chr5:60524000-60525600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr5:60524000-60525600 Enhancers HMEC breast
11 chr5:60524000-60525800 Enhancers NHLF lung
12 chr5:60524000-60526800 Enhancers Esophagus oesophagus
13 chr5:60524200-60525400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr5:60524200-60525400 Enhancers Primary hematopoietic stem cells short term culture blood
15 chr5:60524200-60525400 Enhancers GM12878-XiMat blood
16 chr5:60524200-60525600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr5:60524200-60525800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr5:60524200-60525800 Enhancers Skeletal Muscle Female skeletal muscle
19 chr5:60524200-60525800 Enhancers HUVEC blood vessel
20 chr5:60524200-60527000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr5:60524400-60525400 Enhancers Brain Angular Gyrus brain
22 chr5:60524400-60525400 Enhancers Brain Cingulate Gyrus brain
23 chr5:60524400-60525600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr5:60524400-60525600 Enhancers Fetal Muscle Trunk muscle
25 chr5:60524400-60525600 Enhancers Fetal Thymus thymus
26 chr5:60524600-60525400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr5:60524600-60525400 Enhancers Brain Hippocampus Middle brain
28 chr5:60524600-60525600 Enhancers HUES6 Cell Line embryonic stem cell
29 chr5:60524600-60525600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
30 chr5:60524600-60525600 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr5:60524600-60525800 Enhancers Stomach Mucosa stomach
32 chr5:60524600-60526600 Enhancers Spleen Spleen
33 chr5:60524600-60528600 Weak transcription HSMMtube muscle
34 chr5:60524800-60525400 Enhancers NH-A brain
35 chr5:60524800-60525600 Enhancers Left Ventricle heart
36 chr5:60524800-60525600 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
37 chr5:60524800-60526200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
38 chr5:60525000-60525800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
39 chr5:60525000-60526000 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr5:60525000-60526000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr5:60525200-60525600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
42 chr5:60525200-60525600 Weak transcription Osteobl bone
43 chr5:60525200-60525800 Enhancers Ovary ovary
44 chr5:60525200-60526000 Enhancers Fetal Lung lung
45 chr5:60525200-60526200 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr5:60525200-60528000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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