Variant report

Variant	rs4081379
Chromosome Location	chr1:203348910-203348911
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs6428005	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6661852	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6662062	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6697850	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:203336800-203349200	Weak transcription	Pancreas	Pancrea
2	chr1:203343800-203349000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr1:203344400-203349200	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr1:203346800-203349200	Weak transcription	Rectal Mucosa Donor 29	rectum
5	chr1:203347600-203349400	Enhancers	Fetal Brain Male	brain
6	chr1:203347600-203349400	Enhancers	Fetal Intestine Small	intestine
7	chr1:203347600-203350400	Enhancers	Placenta Amnion	Placenta Amnion
8	chr1:203347600-203350600	Enhancers	Aorta	Aorta
9	chr1:203347600-203350600	Enhancers	Left Ventricle	heart
10	chr1:203347600-203350800	Enhancers	Adipose Nuclei	Adipose
11	chr1:203347600-203351600	Enhancers	Colon Smooth Muscle	Colon
12	chr1:203347600-203351800	Enhancers	Fetal Stomach	stomach
13	chr1:203347600-203351800	Enhancers	Ovary	ovary
14	chr1:203347800-203349000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr1:203347800-203349200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
16	chr1:203347800-203349400	Enhancers	Fetal Lung	lung
17	chr1:203347800-203349400	Enhancers	Placenta	Placenta
18	chr1:203347800-203349400	Enhancers	Skeletal Muscle Female	skeletal muscle
19	chr1:203347800-203350800	Enhancers	Fetal Muscle Leg	muscle
20	chr1:203347800-203352200	Enhancers	Right Atrium	heart
21	chr1:203348000-203351000	Weak transcription	Right Ventricle	heart
22	chr1:203348000-203351800	Enhancers	Primary monocytes fromperipheralblood	blood
23	chr1:203348400-203349000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr1:203348400-203351600	Enhancers	Duodenum Smooth Muscle	Duodenum
25	chr1:203348600-203349000	Enhancers	Stomach Mucosa	stomach
26	chr1:203348600-203349200	Enhancers	Brain Angular Gyrus	brain
27	chr1:203348600-203349200	Enhancers	Brain Hippocampus Middle	brain
28	chr1:203348600-203349400	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr1:203348600-203349600	Enhancers	Fetal Intestine Large	intestine
30	chr1:203348600-203349800	Weak transcription	Fetal Kidney	kidney
31	chr1:203348600-203352200	Enhancers	Primary B cells from peripheral blood	blood
32	chr1:203348800-203349000	Flanking Active TSS	Rectal Smooth Muscle	rectum
33	chr1:203348800-203349200	Enhancers	Stomach Smooth Muscle	stomach
34	chr1:203348800-203349400	Enhancers	Gastric	stomach
35	chr1:203348800-203349800	Enhancers	Primary B cells from cord blood	blood
36	chr1:203348800-203349800	Enhancers	Brain Inferior Temporal Lobe	brain
37	chr1:203348800-203351600	Enhancers	Fetal Heart	heart

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