Variant report

Variant rs409558
Chromosome Location chr6:31708147-31708148
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31702400-31708800 Flanking Active TSS Primary hematopoietic stem cells blood
2 chr6:31704200-31709000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr6:31704200-31709000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr6:31704400-31708800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
5 chr6:31704400-31709000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
6 chr6:31706600-31708800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
7 chr6:31706600-31708800 Active TSS A549 lung
8 chr6:31706800-31708800 Active TSS ES-I3 Cell Line embryonic stem cell
9 chr6:31707000-31708400 Flanking Active TSS Liver Liver
10 chr6:31707000-31708400 Active TSS Pancreatic Islets Pancreatic Islet
11 chr6:31707000-31708400 Active TSS HSMMtube muscle
12 chr6:31707000-31709000 Enhancers Fetal Brain Male brain
13 chr6:31707000-31709200 Active TSS Brain Germinal Matrix brain
14 chr6:31707200-31708200 Active TSS ES-WA7 Cell Line embryonic stem cell
15 chr6:31707200-31708200 Active TSS Pancreas Pancrea
16 chr6:31707200-31708400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
17 chr6:31707200-31708400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr6:31707200-31708400 Active TSS Fetal Kidney kidney
19 chr6:31707200-31708400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
20 chr6:31707200-31708600 Active TSS H9 Cell Line embryonic stem cell
21 chr6:31707200-31708600 Active TSS HUES6 Cell Line embryonic stem cell
22 chr6:31707200-31708600 Flanking Active TSS Adipose Nuclei Adipose
23 chr6:31707200-31708800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr6:31707200-31708800 Flanking Active TSS Primary monocytes fromperipheralblood blood
25 chr6:31707200-31708800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
26 chr6:31707200-31708800 Flanking Active TSS Fetal Muscle Leg muscle
27 chr6:31707200-31709000 Flanking Active TSS Primary B cells from cord blood blood
28 chr6:31707400-31708200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr6:31707400-31708200 Active TSS Muscle Satellite Cultured Cells --
30 chr6:31707400-31708200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
31 chr6:31707400-31708200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr6:31707400-31708200 Active TSS Fetal Lung lung
33 chr6:31707400-31708200 Active TSS HMEC breast
34 chr6:31707400-31708400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr6:31707400-31708400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr6:31707400-31708400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr6:31707400-31708400 Active TSS Brain Angular Gyrus brain
38 chr6:31707400-31708400 Active TSS Brain Inferior Temporal Lobe brain
39 chr6:31707400-31708400 Active TSS Ovary ovary
40 chr6:31707400-31708400 Active TSS Stomach Mucosa stomach
41 chr6:31707400-31708600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
42 chr6:31707400-31708600 Active TSS iPS-18 Cell Line embryonic stem cell
43 chr6:31707400-31708600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr6:31707400-31708600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr6:31707400-31708600 Active TSS Breast Myoepithelial Primary Cells Breast
46 chr6:31707400-31708600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr6:31707400-31708600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
48 chr6:31707400-31708600 Active TSS Brain Anterior Caudate brain
49 chr6:31707400-31708600 Active TSS Brain Hippocampus Middle brain
50 chr6:31707400-31708600 Active TSS Brain Dorsolateral Prefrontal Cortex brain

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