Variant report

Variant	rs411783
Chromosome Location	chr11:10463515-10463516
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:10451018..10453193-chr11:10462043..10463802,2	K562	blood:
2	chr11:10459654..10465823-chr11:10469269..10473470,7	MCF-7	breast:

Variant related genes	Relation type
ENSG00000133805	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430319	chr11:10027543-10711224	Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
2	nsv896990	chr11:10458596-10514707	Enhancers Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	esv3431765	chr11:10463326-10465324	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:10457600-10471800	Weak transcription	NHDF-Ad	bronchial
2	chr11:10459400-10465600	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr11:10460400-10463600	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr11:10460400-10464800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr11:10461400-10463600	Weak transcription	Primary neutrophils fromperipheralblood	blood
6	chr11:10462600-10464000	Enhancers	Primary T cells from cord blood	blood
7	chr11:10462600-10464600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
8	chr11:10462600-10467400	Enhancers	Primary B cells from peripheral blood	blood
9	chr11:10462600-10467600	Enhancers	Fetal Thymus	thymus
10	chr11:10462800-10463800	Enhancers	HSMMtube	muscle
11	chr11:10462800-10464400	Enhancers	GM12878-XiMat	blood
12	chr11:10462800-10467600	Enhancers	Primary hematopoietic stem cells short term culture	blood
13	chr11:10463000-10463600	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr11:10463000-10463800	Enhancers	Primary hematopoietic stem cells	blood
15	chr11:10463000-10464600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
16	chr11:10463000-10467000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr11:10463000-10467000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr11:10463200-10463800	Enhancers	NHEK	skin
19	chr11:10463200-10464000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
20	chr11:10463200-10464000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
21	chr11:10463200-10464000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
22	chr11:10463200-10464000	Enhancers	Primary T helper cells PMA-I stimulated	--
23	chr11:10463200-10464000	Enhancers	Primary T helper cells fromperipheralblood	blood
24	chr11:10463200-10464000	Enhancers	Primary T killer memory cells from peripheral blood	blood
25	chr11:10463200-10464000	Enhancers	Dnd41	blood
26	chr11:10463200-10464200	Enhancers	Primary T cells fromperipheralblood	blood
27	chr11:10463200-10464200	Enhancers	Primary T helper naive cells from peripheral blood	blood
28	chr11:10463200-10465400	Enhancers	Primary B cells from cord blood	blood
29	chr11:10463400-10463600	Enhancers	Rectal Mucosa Donor 29	rectum
30	chr11:10463400-10463800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
31	chr11:10463400-10464000	Enhancers	HepG2	liver
32	chr11:10463400-10464800	Enhancers	Thymus	Thymus
33	chr11:10463400-10465000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr11:10463400-10466400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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