Variant report

Variant	rs41266803
Chromosome Location	chr6:26199454-26199455
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:419)
CpG islands
(count:0)
Chromatin interactive
region (count:69)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:419 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TAF1	chr6:26198960-26199993	PFSK-1	brain:	n/a	n/a
2	POLR2A	chr6:26198429-26200562	Raji	blood:	n/a	n/a
3	POLR2A	chr6:26198413-26200653	H1-neurons	neurons:	n/a	n/a
4	SIN3A	chr6:26198741-26200085	GM12878	blood:	n/a	n/a
5	POLR2A	chr6:26198093-26200571	SK-N-SH	brain:	n/a	n/a
6	POLR2A	chr6:26193825-26201103	K562	blood:	n/a	n/a
7	CEBPD	chr6:26197958-26200955	K562	blood:	n/a	chr6:26199490-26199501
8	CREB1	chr6:26198433-26200072	HepG2	liver:	n/a	n/a
9	CEBPB	chr6:26199312-26199637	K562	blood:	n/a	chr6:26199583-26199591
10	POLR2A	chr6:26199281-26200008	HepG2	liver:	n/a	n/a
11	TAF1	chr6:26199044-26200181	Hela-S3	cervix:	n/a	n/a
12	TBP	chr6:26199283-26199953	H1-hESC	embryonic stem cell:	n/a	n/a
13	EP300	chr6:26199335-26199938	GM12878	blood:	n/a	n/a
14	FOS	chr6:26199351-26199886	K562	blood:	n/a	chr6:26199581-26199590
15	POLR2A	chr6:26187684-26208312	K562	blood:	n/a	n/a
16	POLR2A	chr6:26195351-26200889	H1-hESC	embryonic stem cell:	n/a	n/a
17	UBTF	chr6:26198050-26200726	K562	blood:	n/a	n/a
18	PAX5	chr6:26199041-26199574	GM12878	blood:	n/a	n/a
19	TAF1	chr6:26199019-26200419	K562	blood:	n/a	n/a
20	ARID3A	chr6:26198748-26199871	K562	blood:	n/a	n/a
21	YY1	chr6:26199215-26199601	HepG2	liver:	n/a	n/a
22	POLR2A	chr6:26198447-26200465	HEK293	kidney:	n/a	n/a
23	CEBPB	chr6:26199307-26199928	HepG2	liver:	n/a	chr6:26199583-26199591
24	ATF2	chr6:26194955-26200949	H1-hESC	embryonic stem cell:	n/a	n/a
25	TBL1XR1	chr6:26199036-26200818	K562	blood:	n/a	n/a
26	BCLAF1	chr6:26198316-26200518	GM12878	blood:	n/a	n/a
27	SIN3AK20	chr6:26198407-26200001	HCT-116	colon:	n/a	n/a
28	TAF7	chr6:26198846-26200685	K562	blood:	n/a	n/a
29	CEBPB	chr6:26199277-26199914	MCF-7	breast:	n/a	chr6:26199583-26199591
30	BCLAF1	chr6:26192611-26200894	K562	blood:	n/a	n/a
31	SIN3AK20	chr6:26199237-26199573	PFSK-1	brain:	n/a	n/a
32	MAFK	chr6:26199376-26199813	HepG2	liver:	n/a	n/a
33	NFATC1	chr6:26198406-26200626	GM12878	blood:	n/a	n/a
34	MAZ	chr6:26199305-26200523	GM12878	blood:	n/a	n/a
35	POLR2A	chr6:26198228-26200565	GM18951	blood:	n/a	n/a
36	CEBPB	chr6:26199262-26199937	K562	blood:	n/a	chr6:26199583-26199591
37	YY1	chr6:26199211-26199866	SK-N-SH_RA	brain:	n/a	n/a
38	TCF7L2	chr6:26199414-26199753	PANC-1	pancreas:	n/a	n/a
39	USF1	chr6:26199028-26199839	K562	blood:	n/a	n/a
40	TCF7L2	chr6:26199206-26199984	HCT-116	colon:	n/a	n/a
41	RXRA	chr6:26198986-26199600	GM12878	blood:	n/a	n/a
42	POLR2A	chr6:26196587-26200011	MCF10A-Er-Src	breast:	n/a	n/a
43	POLR2A	chr6:26198003-26200608	GM12891	blood:	n/a	n/a
44	REST	chr6:26199242-26199579	SK-N-SH	brain:	n/a	n/a
45	YY1	chr6:26199017-26199646	H1-hESC	embryonic stem cell:	n/a	n/a
46	POLR2A	chr6:26198308-26200543	HCT-116	colon:	n/a	n/a
47	ZBTB7A	chr6:26199244-26199461	K562	blood:	n/a	n/a
48	KAP1	chr6:26199332-26199715	K562	blood:	n/a	n/a
49	ZEB1	chr6:26199030-26199532	GM12878	blood:	n/a	n/a
50	FOSL2	chr6:26199261-26200205	HepG2	liver:	n/a	chr6:26199581-26199590

No data

(count:69 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr1:169073988..169075864-chr6:26199270..26200811,2	MCF-7	breast:
2	chr16:30537465..30539129-chr6:26197966..26199799,2	MCF-7	breast:
3	chr6:26199071..26200007-chr6:26216694..26217540,4	Hela-S3	cervix:
4	chr6:26197296..26200583-chr6:27100054..27103203,5	MCF-7	breast:
5	chr6:26198554..26200175-chr6:26536662..26538943,2	K562	blood:
6	chr1:17231254..17231873-chr6:26199355..26199909,2	Hela-S3	cervix:
7	chr1:149858480..149859451-chr6:26199076..26199698,2	Hela-S3	cervix:
8	chr11:67055725..67056438-chr6:26199156..26199993,2	NB4	blood:
9	chr15:78832364..78832906-chr6:26199079..26199951,2	NB4	blood:
10	chr2:48133532..48134453-chr6:26198677..26199506,2	HCT-116	colon:
11	chr11:62554047..62556731-chr6:26198828..26201701,2	K562	blood:
12	chr16:19728927..19729482-chr6:26199284..26199885,2	Hela-S3	cervix:
13	chr6:26044090..26046416-chr6:26198004..26201095,3	MCF-7	breast:
14	chr6:26198756..26200403-chr6:27791864..27793365,2	K562	blood:
15	chr6:26198322..26200388-chr6:26537916..26540393,2	K562	blood:
16	chr6:26157761..26158647-chr6:26198967..26199806,3	MCF-7	breast:
17	chr6:26197676..26199688-chr6:27803867..27806296,2	MCF-7	breast:
18	chr6:26158344..26159047-chr6:26199394..26200119,2	NB4	blood:
19	chr6:26156235..26156818-chr6:26198922..26199521,2	Hela-S3	cervix:
20	chr6:26124286..26124791-chr6:26199350..26200021,2	Hela-S3	cervix:
21	chr6:26196435..26200575-chr6:27099094..27104350,6	MCF-7	breast:
22	chr20:47537272..47539500-chr6:26197550..26199788,2	MCF-7	breast:
23	chr6:26030021..26034897-chr6:26196138..26201230,10	MCF-7	breast:
24	chr6:26196890..26209578-chr6:27096615..27108451,46	K562	blood:
25	chr6:26198124..26199998-chr6:26520705..26522799,2	K562	blood:
26	chr6:26196862..26203126-chr6:27774221..27779033,8	MCF-7	breast:
27	chr6:26198976..26200690-chr8:144396916..144399356,2	MCF-7	breast:
28	chr2:39663884..39664565-chr6:26199044..26199597,2	Hela-S3	cervix:
29	chr6:26193858..26202011-chr6:27112529..27117825,14	K562	blood:
30	chr6:26195075..26199998-chr6:26518402..26523264,7	K562	blood:
31	chr6:3157349..3159256-chr6:26198220..26201219,2	K562	blood:
32	chr5:34914986..34915825-chr6:26198946..26199593,2	Hela-S3	cervix:
33	chr6:17582130..17584573-chr6:26197697..26200325,2	MCF-7	breast:
34	chr5:79950077..79950796-chr6:26199069..26200065,2	NB4	blood:
35	chr6:26195729..26208268-chr6:27092660..27105612,50	K562	blood:
36	chr1:45185248..45187840-chr6:26198016..26200996,2	K562	blood:
37	chr6:26199305..26201035-chr6:27856541..27859187,2	K562	blood:
38	chr17:74733016..74734113-chr6:26199054..26199613,3	Hela-S3	cervix:
39	chr6:26197661..26200522-chr9:91932409..91933987,2	MCF-7	breast:
40	chr1:155903795..155904626-chr6:26198868..26199545,2	Hela-S3	cervix:
41	chr15:41576041..41576567-chr6:26198868..26199859,2	Hela-S3	cervix:
42	chr6:26197952..26199936-chr6:27859957..27865215,4	K562	blood:
43	chr6:26199067..26201068-chr7:44834709..44838117,3	K562	blood:
44	chr6:26198913..26199470-chrX:40439931..40440805,2	Hela-S3	cervix:
45	chr15:44718817..44719519-chr6:26198901..26199786,2	Hela-S3	cervix:
46	chr6:26195849..26201222-chr6:27858647..27864324,7	K562	blood:
47	chr6:26041361..26043937-chr6:26197910..26199861,2	MCF-7	breast:
48	chr17:39845714..39848067-chr6:26197980..26200504,2	MCF-7	breast:
49	chr6:26198554..26201743-chr6:27781165..27784293,4	MCF-7	breast:
50	chr6:26198826..26200652-chr6:27777401..27778996,2	K562	blood:

No data

Variant related genes	Relation type
HIST1H3D	TF binding region
HIST1H2BF	TF binding region
ENSG00000217275	TF binding region
ENSG00000132680	Chromatin interaction
ENSG00000103550	Chromatin interaction
ENSG00000188994	Chromatin interaction
ENSG00000173812	Chromatin interaction
ENSG00000269176	Chromatin interaction
ENSG00000187990	Chromatin interaction
ENSG00000263660	Chromatin interaction
ENSG00000137259	Chromatin interaction
ENSG00000228716	Chromatin interaction
ENSG00000196532	Chromatin interaction
ENSG00000011566	Chromatin interaction
ENSG00000184825	Chromatin interaction
ENSG00000185475	Chromatin interaction
ENSG00000124198	Chromatin interaction
ENSG00000247556	Chromatin interaction
ENSG00000196787	Chromatin interaction
ENSG00000196262	Chromatin interaction
ENSG00000184428	Chromatin interaction
ENSG00000158161	Chromatin interaction
ENSG00000233230	Chromatin interaction
ENSG00000184260	Chromatin interaction
ENSG00000113460	Chromatin interaction
ENSG00000196374	Chromatin interaction
ENSG00000155115	Chromatin interaction
ENSG00000203813	Chromatin interaction
ENSG00000272426	Chromatin interaction
ENSG00000113456	Chromatin interaction
ENSG00000269893	Chromatin interaction
ENSG00000124610	Chromatin interaction
ENSG00000185130	Chromatin interaction
ENSG00000092931	Chromatin interaction
ENSG00000169957	Chromatin interaction
ENSG00000124635	Chromatin interaction
ENSG00000238279	Chromatin interaction
ENSG00000008294	Chromatin interaction
ENSG00000217862	Chromatin interaction
ENSG00000259595	Chromatin interaction
ENSG00000218359	Chromatin interaction
ENSG00000170421	Chromatin interaction
ENSG00000172932	Chromatin interaction
ENSG00000196331	Chromatin interaction
ENSG00000124693	Chromatin interaction
ENSG00000187742	Chromatin interaction
ENSG00000182611	Chromatin interaction
ENSG00000180573	Chromatin interaction
ENSG00000234816	Chromatin interaction
ENSG00000184270	Chromatin interaction
ENSG00000184348	Chromatin interaction
ENSG00000168274	Chromatin interaction
ENSG00000199377	Chromatin interaction
ENSG00000137267	Chromatin interaction
ENSG00000231312	Chromatin interaction
ENSG00000041357	Chromatin interaction
ENSG00000267131	Chromatin interaction
ENSG00000182952	Chromatin interaction
ENSG00000233224	Chromatin interaction
ENSG00000197153	Chromatin interaction
ENSG00000137770	Chromatin interaction
ENSG00000197238	Chromatin interaction
ENSG00000143153	Chromatin interaction
ENSG00000178096	Chromatin interaction
ENSG00000272008	Chromatin interaction
ENSG00000197903	Chromatin interaction
ENSG00000182220	Chromatin interaction
ENSG00000196747	Chromatin interaction
ENSG00000199289	Chromatin interaction
ENSG00000228223	Chromatin interaction
ENSG00000265565	Chromatin interaction
ENSG00000158373	Chromatin interaction
ENSG00000161547	Chromatin interaction
ENSG00000196226	Chromatin interaction
ENSG00000163832	Chromatin interaction
ENSG00000168298	Chromatin interaction
ENSG00000121068	Chromatin interaction
ENSG00000113318	Chromatin interaction
ENSG00000198339	Chromatin interaction
ENSG00000231925	Chromatin interaction
ENSG00000187837	Chromatin interaction

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1000308	0.87[ASN][1000 genomes]
rs10484437	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11753625	0.87[AFR][1000 genomes]
rs1341758	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16891404	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16891417	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16891421	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16891427	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16891440	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16891450	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16891453	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16891458	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16891471	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16891477	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs16891497	0.87[ASN][1000 genomes]
rs16891501	0.87[ASN][1000 genomes]
rs16891505	0.87[ASN][1000 genomes]
rs17533076	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17598764	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17600910	0.90[ASN][1000 genomes]
rs34550794	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3818947	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs41266805	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4593350	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs55856153	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs56360223	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs56372675	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61910695	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6913828	0.82[EUR][1000 genomes]
rs989710	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029920	chr6:25638507-26585842	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1215 gene(s)	inside rSNPs	diseases
2	nsv538162	chr6:25638507-26585842	Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1215 gene(s)	inside rSNPs	diseases
3	nsv1030351	chr6:25813178-26352046	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1189 gene(s)	inside rSNPs	diseases
4	nsv1023453	chr6:25853830-26528250	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1201 gene(s)	inside rSNPs	diseases
5	nsv1025237	chr6:25874326-26280867	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1166 gene(s)	inside rSNPs	diseases
6	nsv538163	chr6:25874326-26280867	Enhancers Flanking Active TSS Strong transcription Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1166 gene(s)	inside rSNPs	diseases
7	nsv428137	chr6:25987413-26351920	Enhancers Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1181 gene(s)	inside rSNPs	diseases
8	nsv916992	chr6:25991630-26280921	Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1159 gene(s)	inside rSNPs	diseases
9	nsv1028232	chr6:26005449-26319756	Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1171 gene(s)	inside rSNPs	diseases
10	nsv870314	chr6:26008435-26280807	Flanking Active TSS Enhancers Active TSS Genic enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1151 gene(s)	inside rSNPs	diseases
11	nsv1023457	chr6:26014014-26305407	Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1170 gene(s)	inside rSNPs	diseases
12	nsv1025493	chr6:26026870-26223838	Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1001 gene(s)	inside rSNPs	diseases
13	nsv1023979	chr6:26026870-26287399	Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1113 gene(s)	inside rSNPs	diseases
14	nsv1015782	chr6:26026870-26323895	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1114 gene(s)	inside rSNPs	diseases
15	nsv1018665	chr6:26026870-26352046	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1116 gene(s)	inside rSNPs	diseases
16	nsv482348	chr6:26082709-26261136	Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	799 gene(s)	inside rSNPs	diseases
17	nsv518431	chr6:26148311-26211368	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	521 gene(s)	inside rSNPs	diseases
18	nsv526456	chr6:26148311-26211368	Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	521 gene(s)	inside rSNPs	diseases
19	nsv883490	chr6:26172219-26231608	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	316 gene(s)	inside rSNPs	diseases
20	nsv1021294	chr6:26190316-26246784	Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	309 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:26194200-26200600	Active TSS	GM12878-XiMat	blood
2	chr6:26194800-26199800	Active TSS	Duodenum Smooth Muscle	Duodenum
3	chr6:26194800-26201000	Active TSS	HUES48 Cell Line	embryonic stem cell
4	chr6:26195000-26199800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr6:26195000-26200400	Active TSS	Aorta	Aorta
6	chr6:26195000-26200400	Active TSS	Pancreatic Islets	Pancreatic Islet
7	chr6:26195000-26200600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr6:26195000-26200800	Active TSS	ES-I3 Cell Line	embryonic stem cell
9	chr6:26195000-26200800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr6:26195000-26200800	Active TSS	NHDF-Ad	bronchial
11	chr6:26195200-26200000	Active TSS	Primary T helper naive cells fromperipheralblood	blood
12	chr6:26195200-26200000	Active TSS	Primary T killer naive cells fromperipheralblood	blood
13	chr6:26195200-26200000	Active TSS	NHLF	lung
14	chr6:26195200-26200600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr6:26195200-26200600	Active TSS	Brain Angular Gyrus	brain
16	chr6:26195200-26200800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
17	chr6:26195200-26201000	Active TSS	HUES6 Cell Line	embryonic stem cell
18	chr6:26195200-26201400	Active TSS	H1 Cell Line	embryonic stem cell
19	chr6:26195400-26199800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr6:26195400-26199800	Active TSS	Primary T helper naive cells from peripheral blood	blood
21	chr6:26195400-26199800	Active TSS	Fetal Kidney	kidney
22	chr6:26195400-26200000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr6:26195400-26200600	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr6:26195400-26200800	Active TSS	H9 Cell Line	embryonic stem cell
25	chr6:26195400-26200800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr6:26195400-26200800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
27	chr6:26195400-26200800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr6:26195400-26200800	Active TSS	Hela-S3	cervix
29	chr6:26195600-26200600	Active TSS	HUES64 Cell Line	embryonic stem cell
30	chr6:26195600-26200800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
31	chr6:26195600-26201000	Active TSS	iPS-15b Cell Line	embryonic stem cell
32	chr6:26195600-26201600	Active TSS	iPS-20b Cell Line	embryonic stem cell
33	chr6:26195800-26200600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr6:26196000-26201400	Active TSS	iPS-18 Cell Line	embryonic stem cell
35	chr6:26196200-26200400	Active TSS	HSMMtube	muscle
36	chr6:26196400-26199800	Active TSS	NH-A	brain
37	chr6:26196600-26199800	Active TSS	Primary hematopoietic stem cells short term culture	blood
38	chr6:26196600-26199800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr6:26196800-26199800	Active TSS	NHEK	skin
40	chr6:26196800-26200000	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
41	chr6:26196800-26200000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr6:26196800-26200200	Active TSS	Fetal Intestine Large	intestine
43	chr6:26196800-26200800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
44	chr6:26197000-26199800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr6:26197000-26200000	Active TSS	Brain Hippocampus Middle	brain
46	chr6:26197000-26200200	Active TSS	Primary T killer memory cells from peripheral blood	blood
47	chr6:26197000-26200200	Active TSS	Brain Germinal Matrix	brain
48	chr6:26197000-26200200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
49	chr6:26197000-26200400	Active TSS	Colon Smooth Muscle	Colon
50	chr6:26197200-26199800	Active TSS	Primary B cells from cord blood	blood

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