The 2.0 version of rSNPBase

Variant report

Variant rs41268707
Chromosome Location chr2:173891578-173891579
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173856200-173892600 Weak transcription Brain Angular Gyrus brain
2 chr2:173868000-173902000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:173868600-173892200 Weak transcription Fetal Intestine Large intestine
4 chr2:173877200-173901600 Weak transcription Gastric stomach
5 chr2:173880800-173891600 Strong transcription Liver Liver
6 chr2:173881200-173892400 Weak transcription Fetal Intestine Small intestine
7 chr2:173881200-173912800 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr2:173881400-173897200 Strong transcription Fetal Adrenal Gland Adrenal Gland
9 chr2:173883000-173892200 Weak transcription Right Atrium heart
10 chr2:173884800-173893000 Weak transcription Right Ventricle heart
11 chr2:173885400-173892000 Weak transcription Brain Cingulate Gyrus brain
12 chr2:173885400-173892600 Weak transcription Brain Anterior Caudate brain
13 chr2:173887200-173891800 Weak transcription A549 lung
14 chr2:173887200-173892200 Weak transcription Adipose Nuclei Adipose
15 chr2:173887200-173892400 Weak transcription Hela-S3 cervix
16 chr2:173887200-173892600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr2:173887200-173893000 Weak transcription Psoas Muscle Psoas
18 chr2:173887400-173892000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr2:173887400-173894800 Weak transcription Left Ventricle heart
20 chr2:173888000-173892600 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr2:173888400-173892000 Weak transcription Brain Hippocampus Middle brain
22 chr2:173888600-173892200 Weak transcription Brain Inferior Temporal Lobe brain
23 chr2:173888600-173892600 Weak transcription Ovary ovary
24 chr2:173888800-173892000 Weak transcription Fetal Stomach stomach
25 chr2:173888800-173905600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr2:173888800-173906600 Weak transcription Lung lung
27 chr2:173890000-173892000 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr2:173890000-173892200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr2:173890600-173891600 Enhancers Skeletal Muscle Female skeletal muscle
30 chr2:173890600-173892000 Enhancers Skeletal Muscle Male skeletal muscle
31 chr2:173890600-173894000 Enhancers NHDF-Ad bronchial
32 chr2:173891000-173892200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr2:173891000-173896200 Weak transcription Placenta Placenta
34 chr2:173891000-173908000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr2:173891200-173891800 Enhancers Stomach Smooth Muscle stomach
36 chr2:173891200-173892600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr2:173891200-173892600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr2:173891400-173891600 Enhancers Brain Germinal Matrix brain
39 chr2:173891400-173891600 Enhancers Rectal Smooth Muscle rectum
40 chr2:173891400-173892600 Weak transcription Fetal Muscle Leg muscle
41 chr2:173891400-173894000 Enhancers Fetal Lung lung
42 chr2:173891400-173894200 Enhancers Colon Smooth Muscle Colon
43 chr2:173891400-173896400 Enhancers Fetal Heart heart

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Last update: Aug 31, 2015