The 2.0 version of rSNPBase

Variant report

Variant rs41279509
Chromosome Location chr4:175160487-175160488
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:175147000-175163000 Weak transcription Fetal Stomach stomach
2 chr4:175147600-175195200 Weak transcription Psoas Muscle Psoas
3 chr4:175151000-175163200 Weak transcription Colon Smooth Muscle Colon
4 chr4:175151400-175192800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr4:175151600-175162600 Weak transcription Brain Hippocampus Middle brain
6 chr4:175151800-175169400 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr4:175151800-175181600 Weak transcription Brain Angular Gyrus brain
8 chr4:175152000-175165400 Weak transcription NHDF-Ad bronchial
9 chr4:175152400-175162000 Weak transcription Brain Anterior Caudate brain
10 chr4:175152600-175169400 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr4:175152600-175176400 Weak transcription Muscle Satellite Cultured Cells --
12 chr4:175153000-175174200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr4:175153200-175169000 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr4:175153200-175174600 Weak transcription Primary hematopoietic stem cells blood
15 chr4:175153200-175184000 Weak transcription Lung lung
16 chr4:175153400-175191600 Weak transcription Fetal Muscle Leg muscle
17 chr4:175154200-175161800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr4:175154200-175204000 Weak transcription Aorta Aorta
19 chr4:175154200-175204200 Weak transcription Esophagus oesophagus
20 chr4:175154400-175186200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr4:175154400-175202400 Weak transcription Gastric stomach
22 chr4:175155400-175166800 Weak transcription Brain Inferior Temporal Lobe brain
23 chr4:175155400-175185000 Weak transcription Spleen Spleen
24 chr4:175155600-175177000 Weak transcription Fetal Kidney kidney
25 chr4:175155600-175178200 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr4:175155800-175186600 Weak transcription Fetal Brain Female brain
27 chr4:175156200-175161200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr4:175156200-175162800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
29 chr4:175156200-175169600 Weak transcription HSMMtube muscle
30 chr4:175156200-175174400 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr4:175156200-175174400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr4:175156400-175161200 Strong transcription Primary neutrophils fromperipheralblood blood
33 chr4:175156400-175162400 Strong transcription Primary monocytes fromperipheralblood blood
34 chr4:175156600-175161600 Strong transcription Primary T regulatory cells fromperipheralblood blood
35 chr4:175156600-175162400 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr4:175156600-175165000 Weak transcription HSMM muscle
37 chr4:175156600-175181600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr4:175156800-175165400 Weak transcription HMEC breast
39 chr4:175156800-175177000 Weak transcription Brain Substantia Nigra brain
40 chr4:175156800-175183400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr4:175157000-175162800 Strong transcription Primary T helper cells PMA-I stimulated --
42 chr4:175157000-175179600 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr4:175157000-175181400 Weak transcription Duodenum Mucosa Duodenum
44 chr4:175157000-175184000 Weak transcription Brain Cingulate Gyrus brain
45 chr4:175157200-175161000 Strong transcription Rectal Mucosa Donor 29 rectum
46 chr4:175157200-175162400 Strong transcription Primary T cells fromperipheralblood blood
47 chr4:175157400-175162200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr4:175157600-175161600 Weak transcription HUVEC blood vessel
49 chr4:175158200-175162800 Strong transcription Primary B cells from peripheral blood blood
50 chr4:175158200-175163000 Strong transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015