The 2.0 version of rSNPBase

Variant report

Variant rs41280587
Chromosome Location chr2:99976813-99976814
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99955000-99977000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr2:99955000-99979200 Weak transcription Fetal Stomach stomach
3 chr2:99955000-99979800 Weak transcription Fetal Muscle Trunk muscle
4 chr2:99955200-99979600 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr2:99955200-99982600 Weak transcription Fetal Brain Male brain
6 chr2:99955400-99979600 Weak transcription Primary hematopoietic stem cells blood
7 chr2:99955400-99979600 Weak transcription NH-A brain
8 chr2:99955600-99978200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr2:99956200-99977600 Weak transcription Fetal Thymus thymus
10 chr2:99956200-100004800 Weak transcription Fetal Heart heart
11 chr2:99956400-99979600 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr2:99956400-99979600 Weak transcription HUVEC blood vessel
13 chr2:99956600-99977200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr2:99957000-99977200 Weak transcription Dnd41 blood
15 chr2:99957000-99978000 Weak transcription Small Intestine intestine
16 chr2:99957400-99978200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr2:99957600-99989400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr2:99957800-99978200 Weak transcription Hela-S3 cervix
19 chr2:99958000-99978800 Weak transcription Fetal Intestine Small intestine
20 chr2:99958200-99979600 Weak transcription A549 lung
21 chr2:99959800-99977000 Weak transcription HepG2 liver
22 chr2:99959800-99980000 Weak transcription Lung lung
23 chr2:99961200-99979400 Weak transcription Ovary ovary
24 chr2:99962400-99979800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr2:99962400-99979800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr2:99962600-99977800 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr2:99965000-99977000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr2:99965000-99977000 Weak transcription Duodenum Mucosa Duodenum
29 chr2:99965200-99977000 Weak transcription Primary B cells from cord blood blood
30 chr2:99965200-99978000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr2:99965600-99979800 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr2:99967000-99977800 Weak transcription Primary T cells from cord blood blood
33 chr2:99968000-99977000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr2:99969400-99981600 Weak transcription Fetal Brain Female brain
35 chr2:99970400-99977000 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr2:99970800-99977000 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr2:99970800-99977000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr2:99970800-99977000 Weak transcription NHEK skin
39 chr2:99970800-99977600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr2:99970800-99977600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr2:99970800-99979200 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr2:99970800-99979600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr2:99970800-99979600 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr2:99970800-99979800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr2:99970800-99979800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr2:99971000-99977000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr2:99971000-99978200 Weak transcription Osteobl bone
48 chr2:99971000-99979600 Weak transcription HMEC breast
49 chr2:99971200-99977000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr2:99971200-99978000 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015