The 2.0 version of rSNPBase

Variant report

Variant rs41281611
Chromosome Location chr22:29456797-29456798
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:29441000-29457000 Weak transcription HUVEC blood vessel
2 chr22:29441200-29458000 Weak transcription HMEC breast
3 chr22:29443800-29458600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr22:29447200-29457600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr22:29447200-29458200 Weak transcription Osteobl bone
6 chr22:29447200-29458600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr22:29447400-29458200 Weak transcription NHEK skin
8 chr22:29447400-29458400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr22:29449200-29458400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr22:29449800-29458200 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr22:29450800-29458600 Weak transcription Pancreas Pancrea
12 chr22:29451600-29458200 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr22:29451800-29458200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr22:29451800-29458200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr22:29451800-29465200 Weak transcription Fetal Intestine Small intestine
16 chr22:29451800-29467000 Weak transcription Ovary ovary
17 chr22:29452600-29458400 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr22:29452800-29458200 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr22:29452800-29458200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr22:29452800-29458400 Weak transcription H1 Cell Line embryonic stem cell
21 chr22:29452800-29458400 Weak transcription HSMMtube muscle
22 chr22:29453000-29461000 Weak transcription Dnd41 blood
23 chr22:29455200-29457000 Weak transcription Lung lung
24 chr22:29455200-29458200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr22:29455400-29457800 Weak transcription HepG2 liver
26 chr22:29455400-29458000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr22:29455600-29457000 Weak transcription Fetal Lung lung
28 chr22:29455800-29457200 Weak transcription Fetal Muscle Trunk muscle
29 chr22:29455800-29458200 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr22:29455800-29458200 Weak transcription Fetal Muscle Leg muscle
31 chr22:29455800-29458400 Weak transcription Psoas Muscle Psoas
32 chr22:29455800-29465600 Weak transcription K562 blood
33 chr22:29456000-29458200 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr22:29456400-29456800 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr22:29456400-29457000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr22:29456400-29457400 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr22:29456600-29457200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
38 chr22:29456600-29458400 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr22:29456600-29458600 Enhancers Placenta Placenta

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Last update: Aug 31, 2015